RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TCL1AP56279 114 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 AKR1C1Q04828 323 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 ODF3Q96PU9 254 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 MRPL32Q9BYC8 188 aaKnown RBP8.35□□□□□ -1.07
PSEN1-221ENST00000557293 Q9H521 79 aa8.35□□□□□ -1.07
PSEN1-221ENST00000557293 H3BQ15 152 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 CRYGDP07320 174 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 SLC25A6P12236 298 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 LEPP41159 167 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 CD300CQ08708 224 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 SLAQ13239 276 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 SPANXN5Q5MJ07 72 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 MORN5Q5VZ52 161 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 CLVS1Q8IUQ0 354 aaPredicted RBP8.34□□□□□ -1.07
PSEN1-221ENST00000557293 C15orf40Q8WUR7 153 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 SMIM4Q8WVI0 70 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 PRRT1Q99946 306 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 ARL6Q9H0F7 186 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 ARV1Q9H2C2 271 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 TP53TG3Q9ULZ0 132 aa8.34□□□□□ -1.07
PSEN1-221ENST00000557293 K7EQD1 137 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 MED6O75586 246 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 CCNKO75909 580 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 SLC25A5P05141 298 aaKnown RBP8.33□□□□□ -1.08
PSEN1-221ENST00000557293 ANXA7P20073 488 aaKnown RBP8.33□□□□□ -1.08
PSEN1-221ENST00000557293 SELENOTP62341 195 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 WFDC2Q14508 124 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 Q6ZQT7 251 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 EIF4E3Q8N5X7 224 aaKnown RBP8.33□□□□□ -1.08
PSEN1-221ENST00000557293 LRTM2Q8N967 370 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 ZNF680Q8NEM1 530 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 FAM19A4Q96LR4 140 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-221ENST00000557293 VGLL1Q99990 258 aa8.33□□□□□ -1.08
PSEN1-221ENST00000557293 MRPL16Q9NX20 251 aaKnown RBP8.33□□□□□ -1.08
PSEN1-221ENST00000557293 DUXBA0A1W2PPF3 345 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 ANKRD20A5PA0PJZ0 165 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 C7orf71A4D174 169 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 KLLNB2CW77 178 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 H3BP45 60 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 K7EPK0 472 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 CTDSP2O14595 271 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 IGLC2P0DOY2 106 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 RPP30P78346 268 aaKnown RBP8.32□□□□□ -1.08
PSEN1-221ENST00000557293 SRPXP78539 464 aa8.32□□□□□ -1.08
PSEN1-221ENST00000557293 STRAPQ9Y3F4 350 aaKnown RBP8.32□□□□□ -1.08
PSEN1-221ENST00000557293 SMCO3A2RU48 225 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 IBA57-AS1B1ANH7 110 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 E5RGE8 158 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 MRPS10P82664 201 aaKnown RBP8.31□□□□□ -1.08
PSEN1-221ENST00000557293 ID3Q02535 119 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 ERCC8Q13216 396 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 BTN1A1Q13410 526 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 IBA57Q5T440 356 aaKnown RBP8.31□□□□□ -1.08
PSEN1-221ENST00000557293 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 IQCF2Q8IXL9 164 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 C10orf126Q8N4M7 172 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 TMEM37Q8WXS4 190 aa8.31□□□□□ -1.08
PSEN1-221ENST00000557293 NAA50Q9GZZ1 169 aaKnown RBP8.31□□□□□ -1.08
PSEN1-221ENST00000557293 CTDSPLO15194 276 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 PSCAO43653 123 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 SFTA3P0C7M3 94 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 ANXA3P12429 323 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 ZNF415Q09FC8 603 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 OPCMLQ14982 345 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 CTF1Q16619 201 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 SCXQ7RTU7 201 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 BPIFA4PQ86YQ2 179 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 ZNF479Q96JC4 524 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 SCGB3A2Q96PL1 93 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 AGPAT4-IT1Q9H0P7 198 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 RABL2BQ9UNT1 228 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 RCL1Q9Y2P8 373 aaKnown RBP8.3□□□□□ -1.08
PSEN1-221ENST00000557293 PXMP4Q9Y6I8 212 aa8.3□□□□□ -1.08
PSEN1-221ENST00000557293 A0A087WXM4 84 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 ATP6V1G2O95670 118 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 GYPEP15421 78 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 SRIP30626 198 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 RNASE4P34096 147 aaKnown RBP8.29□□□□□ -1.08
PSEN1-221ENST00000557293 PRR9Q5T870 116 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 NPVFQ9HCQ7 196 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 SCP2D1Q9UJQ7 156 aa8.29□□□□□ -1.08
PSEN1-221ENST00000557293 TRAV5A0A0B4J249 113 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 M0R3E3 92 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 MPDU1O75352 247 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 RRAS2P62070 204 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-221ENST00000557293 POLR2GP62487 172 aaKnown RBP eCLIP8.28□□□□□ -1.08
PSEN1-221ENST00000557293 SLC38A11Q08AI6 406 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 TMEM128Q5BJH2 165 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 PXDC1Q5TGL8 231 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 ZFAND2AQ8N6M9 145 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 AP3S1Q92572 193 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 PKHD1L1Q86WI1 4243 aa8.28□□□□□ -1.08
PSEN1-221ENST00000557293 TRGV4A0A0C4DH28 118 aa8.27□□□□□ -1.09
PSEN1-221ENST00000557293 IGHV3-38A0A0C4DH36 116 aa8.27□□□□□ -1.09
PSEN1-221ENST00000557293 LOC100131303A0A0U1RQF7 123 aa8.27□□□□□ -1.09
PSEN1-221ENST00000557293 FNDC10F2Z333 226 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms