RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 OR4E1P0C645 316 aa12.64□□□□□ -0.39
VIPAS39-209ENST00000556909 BTF3P20290 206 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-209ENST00000556909 ARL16Q0P5N6 197 aa12.64□□□□□ -0.39
VIPAS39-209ENST00000556909 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
VIPAS39-209ENST00000556909 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
VIPAS39-209ENST00000556909 LINC00854A0A1B0GVQ3 168 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 J3KRW8 73 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 IGLC2P0DOY2 106 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 TAS2R30P59541 319 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 OPCMLQ14982 345 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 IAH1Q2TAA2 248 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 MGST2Q99735 147 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 PXMP4Q9Y6I8 212 aa12.63□□□□□ -0.39
VIPAS39-209ENST00000556909 H3BQ15 152 aa12.62□□□□□ -0.39
VIPAS39-209ENST00000556909 CT45A10P0DMU9 189 aa12.62□□□□□ -0.39
VIPAS39-209ENST00000556909 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
VIPAS39-209ENST00000556909 GGACTQ9BVM4 153 aa12.62□□□□□ -0.39
VIPAS39-209ENST00000556909 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
VIPAS39-209ENST00000556909 ZNF586Q9NXT0 402 aa12.62□□□□□ -0.39
VIPAS39-209ENST00000556909 TRAV12-3A0A0B4J271 114 aa12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 NAP1L6A6NFF2 107 aa12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 LEPP41159 167 aa12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 DAZ2Q13117 558 aaKnown RBP12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 C10orf113Q5VZT2 155 aa12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 Q6ZTI0 123 aa12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 SAT2Q96F10 170 aaPredicted RBP12.61□□□□□ -0.39
VIPAS39-209ENST00000556909 NPIPB6E9PJ23 425 aa12.6□□□□□ -0.39
VIPAS39-209ENST00000556909 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
VIPAS39-209ENST00000556909 ZNF431Q8TF32 576 aaPredicted RBP12.6□□□□□ -0.39
VIPAS39-209ENST00000556909 PYGO2Q9BRQ0 406 aa12.6□□□□□ -0.39
VIPAS39-209ENST00000556909 GSKIPQ9P0R6 139 aa12.6□□□□□ -0.39
VIPAS39-209ENST00000556909 HERC1Q15751 4861 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 C7orf66A4D0T2 115 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 INPP1P49441 399 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 LINC00315P59091 139 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 BAK1Q16611 211 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 SPANXN2Q5MJ10 180 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
VIPAS39-209ENST00000556909 A0A096LPF7 62 aa12.58□□□□□ -0.4
VIPAS39-209ENST00000556909 MBPP02686 304 aaPredicted RBP12.58□□□□□ -0.4
VIPAS39-209ENST00000556909 BTCP35070 178 aa12.58□□□□□ -0.4
VIPAS39-209ENST00000556909 GUK1Q16774 197 aa12.58□□□□□ -0.4
VIPAS39-209ENST00000556909 TRIQKQ629K1 86 aa12.58□□□□□ -0.4
VIPAS39-209ENST00000556909 TRAV5A0A0B4J249 113 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 CAMLGP49069 296 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 Q6ZRN7 208 aaPredicted RBP12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 C11orf72Q8NBR9 251 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 MITD1Q8WV92 249 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 DNAJC4Q9NNZ3 241 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 FAT1Q14517 4588 aa12.57□□□□□ -0.4
VIPAS39-209ENST00000556909 TRGV2A0A075B6R0 118 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 CCDC160A6NGH7 325 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 SLC25A5P05141 298 aaKnown RBP12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 Q6ZRG5 221 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 NRARPQ7Z6K4 114 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 ZNF680Q8NEM1 530 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 GSN-AS1Q9NRJ2 163 aa12.56□□□□□ -0.4
VIPAS39-209ENST00000556909 C7orf71A4D174 169 aa12.55□□□□□ -0.4
VIPAS39-209ENST00000556909 ZNF253O75346 499 aa12.55□□□□□ -0.4
VIPAS39-209ENST00000556909 RAB31Q13636 194 aa12.55□□□□□ -0.4
VIPAS39-209ENST00000556909 OR1L4Q8NGR5 311 aa12.55□□□□□ -0.4
VIPAS39-209ENST00000556909 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
VIPAS39-209ENST00000556909 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 KLLNB2CW77 178 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 L7N2F9 121 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 M0R3E3 92 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 CCSO14618 274 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 SIVA1O15304 175 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 VAMP2P63027 116 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 ERCC8Q13216 396 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 BTN1A1Q13410 526 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 PFDN5Q99471 154 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 SDHCQ99643 169 aaPredicted RBP12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 FUT9Q9Y231 359 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 WDR83OSQ9Y284 106 aa12.54□□□□□ -0.4
VIPAS39-209ENST00000556909 CST7O76096 145 aa12.53□□□□□ -0.4
VIPAS39-209ENST00000556909 CD300CQ08708 224 aa12.53□□□□□ -0.4
VIPAS39-209ENST00000556909 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
VIPAS39-209ENST00000556909 LINC00467Q9BRT7 94 aa12.53□□□□□ -0.4
VIPAS39-209ENST00000556909 UQCC1Q9NVA1 299 aa12.53□□□□□ -0.4
VIPAS39-209ENST00000556909 LSM5Q9Y4Y9 91 aaKnown RBP12.53□□□□□ -0.4
VIPAS39-209ENST00000556909 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 CENPXA8MT69 81 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 EPM2AB3EWF7 344 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 NXPH4O95158 308 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 FUSP35637 526 aaKnown RBP eCLIP12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 BCAP31P51572 246 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 CAV2P51636 162 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 RBM38Q9H0Z9 239 aaKnown RBP12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 KLF12Q9Y4X4 402 aa12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 DMBT1Q9UGM3 2413 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-209ENST00000556909 UBE2L5PA0A1B0GUS4 154 aa12.51□□□□□ -0.41
VIPAS39-209ENST00000556909 SPINK4O60575 86 aa12.51□□□□□ -0.41
VIPAS39-209ENST00000556909 NDUFB4O95168 129 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms