RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 H3BTX0 84 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 DNASE2O00115 360 aaPredicted RBP12.27□□□□□ -0.45
PCNX4-213ENST00000556907 PDE6DO43924 150 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 PRB2P02812 416 aaPredicted RBP12.27□□□□□ -0.45
PCNX4-213ENST00000556907 SRP19P09132 144 aaKnown RBP12.27□□□□□ -0.45
PCNX4-213ENST00000556907 PSG9Q00887 426 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 SAMD13Q5VXD3 122 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 Q8N1Y9 231 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 C11orf52Q96A22 123 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 MEGF8Q7Z7M0 2845 aa12.27□□□□□ -0.45
PCNX4-213ENST00000556907 C9JQL5 133 aa12.26□□□□□ -0.45
PCNX4-213ENST00000556907 SOCS3O14543 225 aa12.26□□□□□ -0.45
PCNX4-213ENST00000556907 SNRPCP09234 159 aaKnown RBP12.26□□□□□ -0.45
PCNX4-213ENST00000556907 C5orf17Q8NAS9 161 aa12.26□□□□□ -0.45
PCNX4-213ENST00000556907 CITED4Q96RK1 184 aa12.26□□□□□ -0.45
PCNX4-213ENST00000556907 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
PCNX4-213ENST00000556907 NRN1Q9NPD7 142 aa12.26□□□□□ -0.45
PCNX4-213ENST00000556907 ZNF331Q9NQX6 463 aaPredicted RBP12.26□□□□□ -0.45
PCNX4-213ENST00000556907 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
PCNX4-213ENST00000556907 DEFB121Q5J5C9 76 aa12.25□□□□□ -0.45
PCNX4-213ENST00000556907 SLC35B3Q9H1N7 401 aa12.25□□□□□ -0.45
PCNX4-213ENST00000556907 AAMDCQ9H7C9 122 aa12.25□□□□□ -0.45
PCNX4-213ENST00000556907 SELENOKQ9Y6D0 94 aa12.25□□□□□ -0.45
PCNX4-213ENST00000556907 ATP6V1G1O75348 118 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 CD7P09564 240 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 SFTA3P0C7M3 94 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 ARL6IP6Q8N6S5 226 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 CYB561D1Q8N8Q1 229 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 MRPL53Q96EL3 112 aaKnown RBP12.24□□□□□ -0.45
PCNX4-213ENST00000556907 CLEC5AQ9NY25 188 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 PRELID1Q9Y255 219 aa12.24□□□□□ -0.45
PCNX4-213ENST00000556907 IGKV3-7A0A075B6H7 116 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 TMEM218A2RU14 115 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 PGPA6NDG6 321 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 OR11H12B2RN74 326 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 K7EQG2 157 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 SLC25A5P05141 298 aaKnown RBP12.23□□□□□ -0.45
PCNX4-213ENST00000556907 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
PCNX4-213ENST00000556907 EXOC3-AS1Q8N2X6 119 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 GBGT1Q8N5D6 347 aa12.23□□□□□ -0.45
PCNX4-213ENST00000556907 TRAV8-2A0A0B4J237 113 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 PEX7O00628 323 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 ISLRO14498 428 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 TFPI2P48307 235 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 DCANP1Q8TF63 244 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 HIST1H2BAQ96A08 127 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 C19orf73Q9NVV2 129 aa12.22□□□□□ -0.45
PCNX4-213ENST00000556907 KRBOX1C9JBD0 128 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 ADCYAP1P18509 176 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 ID1P41134 155 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 SNRPD3P62318 126 aaKnown RBP12.21□□□□□ -0.45
PCNX4-213ENST00000556907 WFDC3Q8IUB2 231 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 CMTM2Q8TAZ6 248 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 C2CD4CQ8TF44 421 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 RPUSD4Q96CM3 377 aaKnown RBP12.21□□□□□ -0.45
PCNX4-213ENST00000556907 C16orf92Q96LL3 132 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 ATG101Q9BSB4 218 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 EPDR1Q9UM22 224 aa12.21□□□□□ -0.45
PCNX4-213ENST00000556907 SERTM2A0A1B0GWG4 89 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 TCRAP04437 139 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 AKR1C3P42330 323 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 GNG5P63218 68 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 ODF3L2Q3SX64 289 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 SEC11CQ9BY50 192 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 PARLQ9H300 379 aa12.2□□□□□ -0.46
PCNX4-213ENST00000556907 M0R3E3 92 aa12.19□□□□□ -0.46
PCNX4-213ENST00000556907 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
PCNX4-213ENST00000556907 C10orf91Q5T1B1 145 aa12.19□□□□□ -0.46
PCNX4-213ENST00000556907 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
PCNX4-213ENST00000556907 B9D2Q9BPU9 175 aa12.19□□□□□ -0.46
PCNX4-213ENST00000556907 CARHSP1Q9Y2V2 147 aaKnown RBP12.19□□□□□ -0.46
PCNX4-213ENST00000556907 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 CSN1S1P47710 185 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 CNN1P51911 297 aaKnown RBP12.18□□□□□ -0.46
PCNX4-213ENST00000556907 PSG3Q16557 428 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 FAM74A3Q4VXF1 159 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 SOHLH1Q5JUK2 328 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 DEFB125Q8N687 156 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 RNF182Q8N6D2 247 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 SRD5A3Q9H8P0 318 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 RPH3ALQ9UNE2 315 aa12.18□□□□□ -0.46
PCNX4-213ENST00000556907 F8W036 122 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 FRMD6-AS1P0C7T7 363 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 CEBPGP53567 150 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 IGFL4Q6B9Z1 124 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 TMEM75Q8N9X5 138 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 C20orf173Q96LM9 149 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
PCNX4-213ENST00000556907 AGRNO00468 2067 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 TRBV6-1A0A0K0K1D8 114 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 RBAKDNA6NC62 111 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 C9JCJ5 164 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 K7EQM0 130 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 S100A9P06702 114 aaKnown RBP12.16□□□□□ -0.46
PCNX4-213ENST00000556907 S100A1P23297 94 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 292.6 ms