RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SMIM3Q9BZL3 60 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 WDR61Q9GZS3 305 aaKnown RBP10.28□□□□□ -0.76
SLIRP-207ENST00000556831 AGRNO00468 2067 aa10.28□□□□□ -0.76
SLIRP-207ENST00000556831 NUPR2A6NF83 97 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 AMBPP02760 352 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 FXYD7P58549 80 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 RHOBP62745 196 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 HIST1H1AQ02539 215 aaPredicted RBP10.27□□□□□ -0.77
SLIRP-207ENST00000556831 SVBPQ8N300 66 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 C20orf173Q96LM9 149 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 CLUHP3Q96NS8 147 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 RNF126Q9BV68 326 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 GOLT1BQ9Y3E0 138 aa10.27□□□□□ -0.77
SLIRP-207ENST00000556831 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 RAB5CP51148 216 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 PSG3Q16557 428 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 IGFL4Q6B9Z1 124 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 C11orf45Q8TAV5 145 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 HRH4Q9H3N8 390 aa10.26□□□□□ -0.77
SLIRP-207ENST00000556831 TRAV8-2A0A0B4J237 113 aa10.25□□□□□ -0.77
SLIRP-207ENST00000556831 IGHV4-28A0A0C4DH34 117 aa10.25□□□□□ -0.77
SLIRP-207ENST00000556831 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 SNRPCP09234 159 aaKnown RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 GIG44P09565 113 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 MRPL32Q9BYC8 188 aaKnown RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
SLIRP-207ENST00000556831 ZNF331Q9NQX6 463 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 KLK5Q9Y337 293 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-207ENST00000556831 TIMM9Q9Y5J7 89 aa10.25□□□□□ -0.77
SLIRP-207ENST00000556831 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 H3BTX0 84 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
SLIRP-207ENST00000556831 DEFB4AO15263 64 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 INSP01308 110 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 ZNF266Q14584 549 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 MORN5Q5VZ52 161 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 OR8A1Q8NGG7 326 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 OR10J6PQ8NGY7 276 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 PCNPQ8WW12 178 aaKnown RBP10.24□□□□□ -0.77
SLIRP-207ENST00000556831 C17orf77Q96MU5 243 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 ALMS1Q8TCU4 4167 aa10.24□□□□□ -0.77
SLIRP-207ENST00000556831 SNAPINO95295 136 aa10.23□□□□□ -0.77
SLIRP-207ENST00000556831 Q8NAQ8 132 aa10.23□□□□□ -0.77
SLIRP-207ENST00000556831 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
SLIRP-207ENST00000556831 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
SLIRP-207ENST00000556831 TMEM14CQ9P0S9 112 aa10.23□□□□□ -0.77
SLIRP-207ENST00000556831 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 SMIM9A6NGZ8 99 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 OR7C2O60412 319 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 HBE1P02100 147 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 APOC3P02656 99 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 ZNF705DP0CH99 300 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-207ENST00000556831 ZNF705BP0CI00 300 aaPredicted RBP10.22□□□□□ -0.77
SLIRP-207ENST00000556831 HIST1H1EP10412 219 aaKnown RBP10.22□□□□□ -0.77
SLIRP-207ENST00000556831 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 SULT1A2P50226 295 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 TAS2R45P59539 299 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 PDE6HQ13956 83 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 GCSAMLQ5JQS6 135 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 IGF2BP2-AS1Q96M15 143 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 FUT9Q9Y231 359 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
SLIRP-207ENST00000556831 X6R8D5 127 aa10.22□□□□□ -0.77
SLIRP-207ENST00000556831 TMEM218A2RU14 115 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 H3BQ15 152 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 M0R2Z0 102 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 SLC17A3O00476 420 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 ZNF253O75346 499 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 SEC11BP0C7V7 166 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 TSPOP30536 169 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 NANOS2P60321 138 aaKnown RBP10.21□□□□□ -0.77
SLIRP-207ENST00000556831 ACOT6Q3I5F7 207 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-207ENST00000556831 KHDC3LQ587J8 217 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 PHLDA1Q8WV24 401 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-207ENST00000556831 SEC11CQ9BY50 192 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 PARD6GQ9BYG4 376 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-207ENST00000556831 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-207ENST00000556831 CYTL1Q9NRR1 136 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 RFNGQ9Y644 331 aa10.21□□□□□ -0.77
SLIRP-207ENST00000556831 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 PYYP10082 97 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 BTN1A1Q13410 526 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 RRN3P1Q2M238 152 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 FAM122CQ6P4D5 195 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 CEMP1Q6PRD7 247 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-207ENST00000556831 ZNF705AQ6ZN79 300 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-207ENST00000556831 MIR17HGQ75NE6 70 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-207ENST00000556831 TMED6Q8WW62 240 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 NEU1Q99519 415 aa10.2□□□□□ -0.78
SLIRP-207ENST00000556831 PAXXQ9BUH6 204 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms