RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
SHMT2-223ENST00000556689 AKR1C1Q04828 323 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 SLC38A11Q08AI6 406 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 ZNF266Q14584 549 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 TTC32Q5I0X7 151 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 TMEM252Q8N6L7 170 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 AQP10Q96PS8 301 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 LINC01587Q99440 93 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 TRGV9Q99603 122 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 SLC25A22Q9H936 323 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 KCNIP2Q9NS61 270 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 TNFSF18Q9UNG2 199 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 HSPB11Q9Y547 144 aa8.82□□□□□ -1
SHMT2-223ENST00000556689 SMCO3A2RU48 225 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 ZNF98A6NK75 572 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 TAAR5O14804 337 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 CST7O76096 145 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 IFNA5P01569 189 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 BTF3P20290 206 aaKnown RBP8.81□□□□□ -1
SHMT2-223ENST00000556689 RAB31Q13636 194 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 ATP6V1FQ16864 119 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 OR1B1Q8NGR6 318 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 C17orf77Q96MU5 243 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 GGACTQ9BVM4 153 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 SLC25A32Q9H2D1 315 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 SLC45A2Q9UMX9 530 aa8.81□□□□□ -1
SHMT2-223ENST00000556689 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
SHMT2-223ENST00000556689 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 IGSF23A1L1A6 192 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 FAM24AA6NFZ4 105 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 H0YIZ8 118 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 HTN1P15515 57 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 S100A7P31151 101 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 TAS2R60P59551 318 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 DLK1P80370 383 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 IGFL4Q6B9Z1 124 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 TMEM14EPQ6UXP3 125 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 BAP18Q8IXM2 172 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 OR5C1Q8NGR4 320 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 GPR82Q96P67 336 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 ARPC5LQ9BPX5 153 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 TMEM147Q9BVK8 224 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 SLC25A39Q9BZJ4 359 aaPredicted RBP8.8□□□□□ -1
SHMT2-223ENST00000556689 ARL6Q9H0F7 186 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 Q9H3A6 140 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 UQCC1Q9NVA1 299 aa8.8□□□□□ -1
SHMT2-223ENST00000556689 IGKV1OR2-108A0A075B7D4 117 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 UBE2L5PA0A1B0GUS4 154 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 FNDC10F2Z333 226 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 ORM2P19652 201 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 OR5I1Q13606 314 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 TMEM144Q7Z5S9 345 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 THAP8Q8NA92 274 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 SCGB1C1Q8TD33 95 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 GNPNAT1Q96EK6 184 aaPredicted RBP8.79□□□□□ -1
SHMT2-223ENST00000556689 C16orf74Q96GX8 76 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 UHRF2Q96PU4 802 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 ATP5SQ99766 215 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 KRTAP1-5Q9BYS1 174 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 PPP1R14DQ9NXH3 145 aa8.79□□□□□ -1
SHMT2-223ENST00000556689 TRAV8-2A0A0B4J237 113 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 A0A1W2PPQ1 181 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 C17orf112F2Z3M2 114 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 G3V3Q6 166 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 BCL2L11O43521 198 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 MPDU1O75352 247 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 INAFM2P0DMQ5 153 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 RHOBP62745 196 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 Q5BKY6 102 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 KCNRGQ8N5I3 272 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 RNF182Q8N6D2 247 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 ZNF738Q8NE65 137 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 ZNF503Q96F45 646 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 SMIM3Q9BZL3 60 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 C11orf1Q9H5F2 150 aa8.78□□□□□ -1
SHMT2-223ENST00000556689 NOP10Q9NPE3 64 aaKnown RBP8.78□□□□□ -1
SHMT2-223ENST00000556689 TRAV26-1A0A087WT03 109 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 RNF222A6NCQ9 220 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 M6PRP20645 277 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 CD300CQ08708 224 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 ESRGQ1W209 222 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
SHMT2-223ENST00000556689 BPIFCQ8NFQ6 507 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 UPK3BQ9BT76 320 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
SHMT2-223ENST00000556689 TPT1P13693 172 aaKnown RBP8.76□□□□□ -1.01
SHMT2-223ENST00000556689 GATA2P23769 480 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-223ENST00000556689 HIST1H1AQ02539 215 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-223ENST00000556689 NHLH2Q02577 135 aa8.76□□□□□ -1.01
SHMT2-223ENST00000556689 TEPPQ6URK8 271 aa8.76□□□□□ -1.01
SHMT2-223ENST00000556689 TMEM182Q6ZP80 229 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-223ENST00000556689 TMUB2Q71RG4 321 aa8.76□□□□□ -1.01
SHMT2-223ENST00000556689 OR11H4Q8NGC9 324 aa8.76□□□□□ -1.01
SHMT2-223ENST00000556689 OR8A1Q8NGG7 326 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms