RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 AKR1C4P17516 323 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 ORM2P19652 201 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 CXCL3P19876 107 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 GATA2P23769 480 aaPredicted RBP6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 S100A7P31151 101 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 PLP1P60201 277 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 SRPXP78539 464 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 BAP18Q8IXM2 172 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 LRTM2Q8N967 370 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 BPIFCQ8NFQ6 507 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 OR8A1Q8NGG7 326 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 OR1S1Q8NH92 325 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 RXFP4Q8TDU9 374 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 C16orf74Q96GX8 76 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 SLC25A22Q9H936 323 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 SCP2D1Q9UJQ7 156 aa6.15□□□□□ -1.42
GTF2A1-204ENST00000556268 DUXBA0A1W2PPF3 345 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 BOLA2-SMG1P6H3BVE0 249 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 MED6O75586 246 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 ANXA3P12429 323 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 CLINT1Q14677 625 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 PSG3Q16557 428 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 TMEM144Q7Z5S9 345 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 SHANK2-AS3Q9BTD1 123 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 TMEM147Q9BVK8 224 aa6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 SLC25A39Q9BZJ4 359 aaPredicted RBP6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 NOP10Q9NPE3 64 aaKnown RBP6.14□□□□□ -1.43
GTF2A1-204ENST00000556268 TRAV26-1A0A087WT03 109 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 A0A087X0K7 114 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 H3BRN7 92 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 H7BYZ3 331 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 ZNF701M0R085 212 aaPredicted RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 MRPS12O15235 138 aaKnown RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 SYNGR2O43760 224 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 IAPPP10997 89 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 RPL7P18124 248 aaKnown RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 M6PRP20645 277 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 XGP55808 180 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 RPP30P78346 268 aaKnown RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 TMEM128Q5BJH2 165 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 TTC32Q5I0X7 151 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 Q6ZRN7 208 aaPredicted RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 ACOT7LQ6ZUV0 252 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 GNPNAT1Q96EK6 184 aaPredicted RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 DIRAS2Q96HU8 199 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 UHRF2Q96PU4 802 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 CIB3Q96Q77 187 aaPredicted RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 C20orf144Q9BQM9 153 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
GTF2A1-204ENST00000556268 PMS2P5A8MQ11 134 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 EPM2AB3EWF7 344 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 RGS5O15539 181 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 HYPMO75409 117 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 CDKN1BP46527 198 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 AMTP48728 403 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 RHOBP62745 196 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 OR5I1Q13606 314 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 CYP2G1PQ6ZSU1 146 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 LYPD1Q8N2G4 141 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 NEXN-AS1Q8NBZ9 246 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 ZNF738Q8NE65 137 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 OR10J6PQ8NGY7 276 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 TMEM18Q96B42 140 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 CTDSP1Q9GZU7 261 aa6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 MRPS16Q9Y3D3 137 aaKnown RBP6.12□□□□□ -1.43
GTF2A1-204ENST00000556268 K7EPK0 472 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 WRBO00258 174 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 IL5P05113 134 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 SMIM18P0DKX4 95 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 HTN1P15515 57 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 SELENOTP62341 195 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 HIST1H1AQ02539 215 aaPredicted RBP6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 FGL1Q08830 312 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 DAZ2Q13117 558 aaKnown RBP6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 IL18Q14116 193 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 SPCS2Q15005 226 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 ZBTB8BQ8NAP8 495 aaPredicted RBP6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 RPUSD4Q96CM3 377 aaKnown RBP6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 C18orf15Q96N68 181 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 MCUBQ9NWR8 336 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 RSL24D1Q9UHA3 163 aaKnown RBP6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 HIGD1AQ9Y241 93 aa6.11□□□□□ -1.43
GTF2A1-204ENST00000556268 IFITM10A6NMD0 228 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 ADAP1O75689 374 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 INAFM2P0DMQ5 153 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 SPANXN5Q5MJ07 72 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 DYNC2LI1Q8TCX1 351 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 ZNF331Q9NQX6 463 aaPredicted RBP6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 PPP1R14DQ9NXH3 145 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 ZNF586Q9NXT0 402 aa6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 PAIP2BQ9ULR5 123 aaKnown RBP6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 STRAPQ9Y3F4 350 aaKnown RBP6.1□□□□□ -1.43
GTF2A1-204ENST00000556268 A0A096LPF7 62 aa6.09□□□□□ -1.43
GTF2A1-204ENST00000556268 A0A0J9YY99 117 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms