RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.11□□□□□ -1.43
CHD8-209ENST00000555935 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 GTSCR1Q86UQ5 136 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 TDHQ8IZJ6 230 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 ATP6V0E2Q8NHE4 81 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 MRPL16Q9NX20 251 aaKnown RBP6.11□□□□□ -1.43
CHD8-209ENST00000555935 AHCTF1Q8WYP5 2266 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 MBD3L4A6NDZ8 208 aaPredicted RBP6.11□□□□□ -1.43
CHD8-209ENST00000555935 MBD3L3A6NE82 208 aaPredicted RBP6.11□□□□□ -1.43
CHD8-209ENST00000555935 MBD3L5A6NJ08 208 aaPredicted RBP6.11□□□□□ -1.43
CHD8-209ENST00000555935 M0R3E3 92 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 NDUFB3O43676 98 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 PPP1R27Q86WC6 154 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 MBD3L2Q8NHZ7 208 aaPredicted RBP6.11□□□□□ -1.43
CHD8-209ENST00000555935 RNF125Q96EQ8 232 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 RNF185Q96GF1 192 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 FOXC2Q99958 501 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 TTTY13Q9BZ97 58 aa6.11□□□□□ -1.43
CHD8-209ENST00000555935 MED13Q9UHV7 2174 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 RAI1Q7Z5J4 1906 aaPredicted RBP6.1□□□□□ -1.43
CHD8-209ENST00000555935 KNTC1P50748 2209 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 TMEM8BA6NDV4 472 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 APELAP0DMC3 54 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 DLX6P56179 175 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 ATP1A1-AS1Q5TC04 95 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 TMEM108Q6UXF1 575 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 LCNL1Q6ZST4 164 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 ASCL5Q7RTU5 278 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 ZNF491Q8N8L2 437 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 PRR25Q96S07 402 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 IGHV3-72A0A0B4J1Y9 119 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 LAMTOR5O43504 91 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 EGR2P11161 476 aaPredicted RBP6.1□□□□□ -1.43
CHD8-209ENST00000555935 CD40P25942 277 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 KLRD1Q13241 179 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 Q8N8P6 123 aa6.1□□□□□ -1.43
CHD8-209ENST00000555935 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 TRAV17A0A0B4J275 112 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 FCN3O75636 299 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 PLNP26678 52 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 TMEM155Q4W5P6 130 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 Q5PR19 223 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 ZNF474Q6S9Z5 364 aaPredicted RBP6.09□□□□□ -1.43
CHD8-209ENST00000555935 NUP37Q8NFH4 326 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 TMEM158Q8WZ71 300 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 C1QTNF4Q9BXJ3 329 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 RAB1BQ9H0U4 201 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.43
CHD8-209ENST00000555935 CYSLTR1Q9Y271 337 aa6.09□□□□□ -1.43
CHD8-209ENST00000555935 HEATR1Q9H583 2144 aaKnown RBP6.09□□□□□ -1.43
CHD8-209ENST00000555935 TRBV7-3A0A075B6L6 115 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 NCBP2LA6PVI3 153 aaKnown RBP6.09□□□□□ -1.44
CHD8-209ENST00000555935 C16orf97H3BN30 126 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 K7EIM0 57 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 APOMO95445 188 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 IL4P05112 153 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 IGHV1-8P0DP01 117 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 CNTFRP26992 372 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 CCL8P80075 99 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 MYOZ3Q8TDC0 251 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 ZNF418Q8TF45 676 aaPredicted RBP6.09□□□□□ -1.44
CHD8-209ENST00000555935 ZNF48Q96MX3 618 aaPredicted RBP6.09□□□□□ -1.44
CHD8-209ENST00000555935 TMEM160Q9NX00 188 aa6.09□□□□□ -1.44
CHD8-209ENST00000555935 TRAV40A0A0B4J280 105 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 SPAARA0A1B0GVQ0 90 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 TNFRSF13BO14836 293 aaPredicted RBP6.08□□□□□ -1.44
CHD8-209ENST00000555935 LOXP28300 417 aaPredicted RBP6.08□□□□□ -1.44
CHD8-209ENST00000555935 CRYBA4P53673 196 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 AMTNQ6UX39 209 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 SEM1Q6ZVN7 128 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 MAPKAPK5-AS1Q8N8E1 139 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 RNF5Q99942 180 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 FREM2Q5SZK8 3169 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 FRYLO94915 3013 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 FRYQ5TBA9 3013 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 IGLV2-18A0A075B6J9 118 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 A0A087WX48 190 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 PRSS47A8MTI9 375 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 TMEM178BH3BS89 294 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 FOXI1Q12951 378 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 IGFL2Q6UWQ7 119 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 C8orf86Q6ZUL3 223 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 RPEQ96AT9 228 aa6.08□□□□□ -1.44
CHD8-209ENST00000555935 MRPL35Q9NZE8 188 aaKnown RBP6.08□□□□□ -1.44
CHD8-209ENST00000555935 IGKV2-40A0A087WW87 121 aaPredicted RBP6.07□□□□□ -1.44
CHD8-209ENST00000555935 IGHV1-3A0A0C4DH29 117 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 C17orf100A8MU93 164 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 PRRG2O14669 202 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 IGKV2D-40P01614 121 aaPredicted RBP6.07□□□□□ -1.44
CHD8-209ENST00000555935 RPL7P18124 248 aaKnown RBP6.07□□□□□ -1.44
CHD8-209ENST00000555935 INSL3P51460 131 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 ATP5G2Q06055 141 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 VCX2Q9H322 139 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 FBXL15Q9H469 300 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 KAAG1Q9UBP8 84 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 FABP5P3A8MUU1 101 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 LAGE3Q14657 143 aa6.07□□□□□ -1.44
CHD8-209ENST00000555935 CFAP126Q5VTH2 177 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms