RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 OR8A1Q8NGG7 326 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 OR2T35Q8NGX2 323 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 NIPSNAP3BQ9BS92 247 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 NDUFAF3Q9BU61 184 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 GGACTQ9BVM4 153 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 PARD6GQ9BYG4 376 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 ZNF331Q9NQX6 463 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 WDR83OSQ9Y284 106 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 FAM25EA8MYX2 175 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 H3BQ15 152 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 RTL8CO15255 209 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 CST7O76096 145 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 DUSP14O95147 198 aaKnown RBP6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 Q8N3U1 123 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 C12orf45Q8N5I9 185 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 LYRM2Q9NU23 88 aaPredicted RBP6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 MED9Q9NWA0 146 aa6.57□□□□□ -1.36
VIPAS39-207ENST00000555854 TRAV5A0A0B4J249 113 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 A0A0D9SG52 128 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 UBE2L5PA0A1B0GUS4 154 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 TEX48A0A1B0GUV7 120 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 HTN3P15516 51 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 CXCL2P19875 107 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 TSPOP30536 169 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 CAV2P51636 162 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 RAB32Q13637 225 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 CLLU1Q5K131 121 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 PXDC1Q5TGL8 231 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 TMEM88Q6PEY1 159 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 LCN15Q6UWW0 184 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 SLC7A5P1Q8MH63 180 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 ZNF680Q8NEM1 530 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 RPUSD4Q96CM3 377 aaKnown RBP6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 SAT2Q96F10 170 aaPredicted RBP6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 C2orf50Q96LR7 162 aa6.56□□□□□ -1.36
VIPAS39-207ENST00000555854 C5orf51A6NDU8 294 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 L7N2F9 121 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 GOSR2O14653 212 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 COX7A2P2O60397 106 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 P0DMU3 169 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 FAM231AP0DMU4 169 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 FAM231CP0DMU5 169 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 S100A7P31151 101 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 CAMLGP49069 296 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 S100A10P60903 97 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 VAMP2P63027 116 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 LGALSLQ3ZCW2 172 aaPredicted RBP6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 Q5BKY6 102 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 Q6ZR54 194 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 TMEM252Q8N6L7 170 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 RNASE8Q8TDE3 154 aaKnown RBP6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 SLC50A1Q9BRV3 221 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 TMEM208Q9BTX3 173 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 UQCC1Q9NVA1 299 aa6.55□□□□□ -1.36
VIPAS39-207ENST00000555854 LYRM9A8MSI8 78 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 H0YIZ8 118 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 M0R2N4 97 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 S100A11P31949 105 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 SULT1A1P50225 295 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 B2MP61769 119 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 DAD1P61803 113 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 GCSAMLQ5JQS6 135 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 GFI1BQ5VTD9 330 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 C10orf113Q5VZT2 155 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 BPIFA4PQ86YQ2 179 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 LRRC20Q8TCA0 184 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 FAM210BQ96KR6 192 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 ZNF586Q9NXT0 402 aa6.54□□□□□ -1.36
VIPAS39-207ENST00000555854 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 NDUFB4O95168 129 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 SIX6O95475 246 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 M6PRP20645 277 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 CDKN1BP46527 198 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 RPL29P47914 159 aaKnown RBP6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 RHOBP62745 196 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 ZNF345Q14585 488 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 SLC51BQ86UW2 128 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 OR11H4Q8NGC9 324 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 PHYHIPLQ96FC7 376 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 SLC39A9Q9NUM3 307 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 OR5AC2Q9NZP5 309 aa6.53□□□□□ -1.36
VIPAS39-207ENST00000555854 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 NPIPB6E9PJ23 425 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 M0R3E3 92 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 CT45A10P0DMU9 189 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 DEFB130BP0DP73 79 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 DEFB130AP0DP74 79 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 PYYP10082 97 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 FGF7P21781 194 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 TAS2R60P59551 318 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 BAXQ07812 192 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 LGALS9BQ3B8N2 356 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 TMEM256Q8N2U0 113 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 LINC00612Q8N6U2 182 aa6.52□□□□□ -1.37
VIPAS39-207ENST00000555854 LINC01587Q99440 93 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms