RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ZNF253O75346 499 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 SFTA3P0C7M3 94 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 PAFAH1B2P68402 229 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 PSG9Q00887 426 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 ICAM4Q14773 271 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 C10orf91Q5T1B1 145 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 RBPMS2Q6ZRY4 209 aaKnown RBP7.17□□□□□ -1.26
ACTN1-215ENST00000555616 DEFB125Q8N687 156 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 SUN5Q8TC36 379 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 SEC11CQ9BY50 192 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 NKX6-2Q9C056 277 aaPredicted RBP7.17□□□□□ -1.26
ACTN1-215ENST00000555616 SLC35B3Q9H1N7 401 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 TMPRSS5Q9H3S3 457 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 SRD5A3Q9H8P0 318 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 NRN1Q9NPD7 142 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 ZNF586Q9NXT0 402 aa7.17□□□□□ -1.26
ACTN1-215ENST00000555616 CARHSP1Q9Y2V2 147 aaKnown RBP7.17□□□□□ -1.26
ACTN1-215ENST00000555616 A0A1W2PRE2 83 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 RBMY1BA6NDE4 496 aaKnown RBP7.16□□□□□ -1.26
ACTN1-215ENST00000555616 RBMY1EA6NEQ0 496 aaKnown RBP7.16□□□□□ -1.26
ACTN1-215ENST00000555616 C9JQL5 133 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 F8W036 122 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 RBMY1DP0C7P1 496 aaKnown RBP7.16□□□□□ -1.26
ACTN1-215ENST00000555616 UBE2G2P60604 165 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 CST9LP1Q5W188 147 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 FAM90A2PQ658T7 463 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 CCDC28AQ8IWP9 274 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 LYPD1Q8N2G4 141 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 MUC7Q8TAX7 377 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 RARRES2Q99969 163 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 TXNDC17Q9BRA2 123 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 SLC50A1Q9BRV3 221 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 AAMDCQ9H7C9 122 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 EDA2RQ9HAV5 297 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 CLEC5AQ9NY25 188 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 VAX2Q9UIW0 290 aa7.16□□□□□ -1.26
ACTN1-215ENST00000555616 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 OR4C46A6NHA9 309 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 FAM74A7A6NL05 159 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 H3BTX0 84 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 DNASE2O00115 360 aaPredicted RBP7.15□□□□□ -1.26
ACTN1-215ENST00000555616 PAGE4O60829 102 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 SNRPCP09234 159 aaKnown RBP7.15□□□□□ -1.26
ACTN1-215ENST00000555616 ADCYAP1P18509 176 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 ID1P41134 155 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 RANP62826 216 aaKnown RBP7.15□□□□□ -1.26
ACTN1-215ENST00000555616 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 SVBPQ8N300 66 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 RXFP4Q8TDU9 374 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 OTORQ9NRC9 128 aa7.15□□□□□ -1.26
ACTN1-215ENST00000555616 TRAV2A0A0B4J234 112 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 C11orf94C9JXX5 98 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 SLC17A3O00476 420 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 ISLRO14498 428 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 NDUFB4O95168 129 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 APOC3P02656 99 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 SRP19P09132 144 aaKnown RBP7.14□□□□□ -1.27
ACTN1-215ENST00000555616 MEF2BQ02080 365 aaPredicted RBP7.14□□□□□ -1.27
ACTN1-215ENST00000555616 ODF3L2Q3SX64 289 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 GBGT1Q8N5D6 347 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 CMTM2Q8TAZ6 248 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 C17orf77Q96MU5 243 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 FAM110AQ9BQ89 295 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 TCEAL7Q9BRU2 100 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 MS4A6AQ9H2W1 248 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 Q9H3A6 140 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 RETNQ9HD89 108 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 ZNF331Q9NQX6 463 aaPredicted RBP7.14□□□□□ -1.27
ACTN1-215ENST00000555616 PRELID1Q9Y255 219 aa7.14□□□□□ -1.27
ACTN1-215ENST00000555616 YTHDF2Q9Y5A9 579 aaKnown RBP7.14□□□□□ -1.27
ACTN1-215ENST00000555616 RYR3Q15413 4870 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 DNAH7Q8WXX0 4024 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 GGTLC3B5MD39 225 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 F6UZH7 168 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 PDE6DO43924 150 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 CSN1S1P47710 185 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 TFPI2P48307 235 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 SNRPD3P62318 126 aaKnown RBP7.13□□□□□ -1.27
ACTN1-215ENST00000555616 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
ACTN1-215ENST00000555616 SOHLH1Q5JUK2 328 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 C5orf17Q8NAS9 161 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 DCANP1Q8TF63 244 aa7.13□□□□□ -1.27
ACTN1-215ENST00000555616 LOC102724200A0A096LPH7 203 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-215ENST00000555616 PGPA6NDG6 321 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 TMEM250H0YL14 139 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 K7EQG2 157 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 K7EQM0 130 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 SOCS3O14543 225 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 SNAPINO95295 136 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 SLC25A5P05141 298 aaKnown RBP7.12□□□□□ -1.27
ACTN1-215ENST00000555616 ATP5G3P48201 142 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 EXOC3-AS1Q8N2X6 119 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 ARL6IP6Q8N6S5 226 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 CYB561D1Q8N8Q1 229 aa7.12□□□□□ -1.27
ACTN1-215ENST00000555616 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
ACTN1-215ENST00000555616 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms