RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 C11orf71Q6IPW1 123 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 LYZL1Q6UWQ5 148 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 OR1N2Q8NGR9 330 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 C8orf49Q96NF6 230 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 PRR25Q96S07 402 aa12.65□□□□□ -0.38
TUBB3-209ENST00000555609 BSNQ9UPA5 3926 aa12.65□□□□□ -0.39
TUBB3-209ENST00000555609 CCL25O15444 150 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 COX8AP10176 69 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 PSMG4Q5JS54 123 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 KLF17Q5JT82 389 aaPredicted RBP12.64□□□□□ -0.39
TUBB3-209ENST00000555609 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 VMO1Q7Z5L0 202 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 PRELID3AQ96N28 172 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
TUBB3-209ENST00000555609 IGHV2-70DA0A0C4DH43 119 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 PRR31Q5SQ13 230 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 LGALS9CQ6DKI2 356 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 Q71RC1 249 aaPredicted RBP12.63□□□□□ -0.39
TUBB3-209ENST00000555609 DEFB125Q8N687 156 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 K7EP13 123 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 NUDT3O95989 172 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 MPV17L2Q567V2 206 aa12.63□□□□□ -0.39
TUBB3-209ENST00000555609 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 CCL21O00585 134 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 CD5LO43866 347 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 KLRD1Q13241 179 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 FBLN7Q53RD9 439 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 TPPP3Q9BW30 176 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 SIGLEC8Q9NYZ4 499 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 RP1L1Q8IWN7 2480 aaPredicted RBP12.62□□□□□ -0.39
TUBB3-209ENST00000555609 ROS1P08922 2347 aa12.62□□□□□ -0.39
TUBB3-209ENST00000555609 A0A087X0K7 114 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
TUBB3-209ENST00000555609 D6R8Y8 96 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 PPBPP02775 128 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 CTSGP08311 255 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 IFI27P40305 119 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-209ENST00000555609 RHOGP84095 191 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 FER1L6-AS1Q8NA97 138 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 IGLC6P0CF74 106 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 TMEM11P17152 192 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 NDPQ00604 133 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 MRPL51Q4U2R6 128 aaKnown RBP12.61□□□□□ -0.39
TUBB3-209ENST00000555609 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 PKDREJQ9NTG1 2253 aa12.61□□□□□ -0.39
TUBB3-209ENST00000555609 HBDP02042 147 aa12.6□□□□□ -0.39
TUBB3-209ENST00000555609 FAM106CPP0CH98 169 aa12.6□□□□□ -0.39
TUBB3-209ENST00000555609 GRNP28799 593 aaKnown RBP12.6□□□□□ -0.39
TUBB3-209ENST00000555609 GPR183P32249 361 aa12.6□□□□□ -0.39
TUBB3-209ENST00000555609 UCNP55089 124 aa12.6□□□□□ -0.39
TUBB3-209ENST00000555609 LINC01559Q495D7 138 aa12.6□□□□□ -0.39
TUBB3-209ENST00000555609 FAM110DQ8TAY7 271 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-209ENST00000555609 PRORYQ9H606 182 aa12.6□□□□□ -0.39
TUBB3-209ENST00000555609 LINC01546A6NGU7 62 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 TAX1BP3O14907 124 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 EGR2P11161 476 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-209ENST00000555609 DTX2Q86UW9 622 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 BCL6BQ8N143 479 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-209ENST00000555609 SMAD5-AS1Q9Y6J3 95 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-209ENST00000555609 A0A096LNJ9 63 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 IGHV7-81A0A0B4J1V7 117 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 TMEM213A2RRL7 107 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 FABP5P3A8MUU1 101 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-209ENST00000555609 SEC11AP67812 179 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 PAX8Q06710 450 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 AMN1Q8IY45 258 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 S4R3C0 116 aa12.59□□□□□ -0.39
TUBB3-209ENST00000555609 TLN1Q9Y490 2541 aaKnown RBP12.58□□□□□ -0.39
TUBB3-209ENST00000555609 KALRNO60229 2985 aa12.58□□□□□ -0.39
TUBB3-209ENST00000555609 OR2T8A6NH00 312 aa12.58□□□□□ -0.4
TUBB3-209ENST00000555609 SIVA1O15304 175 aa12.58□□□□□ -0.4
TUBB3-209ENST00000555609 CKS2P33552 79 aa12.58□□□□□ -0.4
TUBB3-209ENST00000555609 SLC50A1Q9BRV3 221 aa12.58□□□□□ -0.4
TUBB3-209ENST00000555609 ADORA2A-AS1P86434 159 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 KLRB1Q12918 225 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 TWIST1Q15672 202 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 VAMP3Q15836 100 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 Q8N9W7 124 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 ASCL2Q99929 193 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 H0Y8G0 127 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 GOSR1O95249 250 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 IGHG4P01861 327 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 DYNAPQ8N1N2 210 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 ZNF502Q8TBZ5 544 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 MRPL53Q96EL3 112 aaKnown RBP12.57□□□□□ -0.4
TUBB3-209ENST00000555609 SIRPDQ9H106 197 aa12.57□□□□□ -0.4
TUBB3-209ENST00000555609 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 CDKN1BP46527 198 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 OR9G4Q8NGQ1 327 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 PIFOQ8TCI5 191 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 VGLL1Q99990 258 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
TUBB3-209ENST00000555609 MUC21A0A0G2JKD1 596 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms