RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TCRAP04437 139 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 PRB4P10163 310 aaPredicted RBP7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 TFPI2P48307 235 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 UBE2G1P62253 170 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 OXLD1Q5BKU9 147 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 ADAMTSL5Q6ZMM2 481 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 GOLT1AQ6ZVE7 132 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 SVBPQ8N300 66 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 RNF182Q8N6D2 247 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 TVP23CQ96ET8 276 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 CITED1Q99966 193 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 ATG101Q9BSB4 218 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 NAT8Q9UHE5 227 aa7.3□□□□□ -1.24
HNRNPC-220ENST00000555585 TRAV8-2A0A0B4J237 113 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 ZNF705FA8MVS1 300 aaPredicted RBP7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 DIRC3C9JPN6 131 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 SNAPINO95295 136 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 S100A9P06702 114 aaKnown RBP7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 ID1P41134 155 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 GNG4P50150 75 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 PAFAH1B2P68402 229 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 ADIRFQ15847 76 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 PSG3Q16557 428 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 RBPMS2Q6ZRY4 209 aaKnown RBP7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 SGK494Q96LW2 274 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 LINC00479Q96M42 142 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 MS4A6AQ9H2W1 248 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 SDF2L1Q9HCN8 221 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 CLEC5AQ9NY25 188 aa7.29□□□□□ -1.24
HNRNPC-220ENST00000555585 SOCS3O14543 225 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 SAP30O75446 220 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 TAS2R60P59551 318 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 CENPWQ5EE01 88 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 SAMD13Q5VXD3 122 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 C12orf54Q6X4T0 127 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 ARL6IP6Q8N6S5 226 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 CLRN3Q8NCR9 226 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 ZNF738Q8NE65 137 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 FMC1Q96HJ9 113 aa7.28□□□□□ -1.24
HNRNPC-220ENST00000555585 IGKV2-40A0A087WW87 121 aaPredicted RBP7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 SERTM2A0A1B0GWG4 89 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 PGPEP1LA6NFU8 196 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 C9JCJ5 164 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 ISLRO14498 428 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 TSPAN4O14817 238 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 IGKV2D-40P01614 121 aaPredicted RBP7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 RPL23P62829 140 aaKnown RBP7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 PNRC1Q12796 327 aaPredicted RBP7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 TMEM183BQ1AE95 376 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 DEFB114Q30KQ6 69 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 PRNTQ86SH4 94 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 BAGE2Q86Y30 109 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 C3orf56Q8N813 242 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 TMEM75Q8N9X5 138 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 TMEM158Q8WZ71 300 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 MRPL53Q96EL3 112 aaKnown RBP7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 C20orf173Q96LM9 149 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 ZNF747Q9BV97 191 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 AURKAIP1Q9NWT8 199 aaPredicted RBP7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 C2CD3Q4AC94 2353 aa7.27□□□□□ -1.25
HNRNPC-220ENST00000555585 TRBV20OR9-2A0A075B6H5 130 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 TRAV8-1A0A0A6YYK1 113 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 PRAC2D3DTV9 90 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 K7EQG2 157 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 MGST1P10620 155 aaKnown RBP7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 FLI1Q01543 452 aaPredicted RBP7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 CD300EQ496F6 205 aaPredicted RBP7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 ATRAIDQ6UW56 229 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 TMEM61Q8N0U2 210 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 NHLRC2Q8NBF2 726 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 DCANP1Q8TF63 244 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 IGF2BP2-AS1Q96M15 143 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 RPS10P5Q9NQ39 176 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 SIGLEC8Q9NYZ4 499 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 PSG8Q9UQ74 426 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
HNRNPC-220ENST00000555585 NIPBLQ6KC79 2804 aaeCLIP7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 TRAV25A0A0B4J276 109 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 C7orf77A4D0Y5 90 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 ZNF688P0C7X2 276 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 ERCC8Q13216 396 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 PSMG4Q5JS54 123 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 Q86TA4 180 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 LINC01551Q86U37 167 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 FAM24BQ8N5W8 94 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 OR10J6PQ8NGY7 276 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 ASCL2Q99929 193 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 VGLL1Q99990 258 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 LY96Q9Y6Y9 160 aa7.25□□□□□ -1.25
HNRNPC-220ENST00000555585 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
HNRNPC-220ENST00000555585 TRBV6-1A0A0K0K1D8 114 aa7.24□□□□□ -1.25
HNRNPC-220ENST00000555585 RBAKDNA6NC62 111 aa7.24□□□□□ -1.25
HNRNPC-220ENST00000555585 IZUMO1RA6ND01 250 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms