RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 DEFB136Q30KP8 78 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 AWAT1Q58HT5 328 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 C10orf91Q5T1B1 145 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.76□□□□□ -1.65
LINC00643-203ENST00000555518 OR4F5Q8NH21 305 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 RXFP4Q8TDU9 374 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 PAXXQ9BUH6 204 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 OR51M1Q9H341 326 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 MANBALQ9NQG1 85 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 ZNF586Q9NXT0 402 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 RABAC1Q9UI14 185 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 TRBV19A0A075B6N1 114 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 IGHV3OR16-13A0A075B7E8 117 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 A0A087X0K7 114 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 IGHV3-74A0A0B4J1X5 117 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 A0A1W2PRE2 83 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 TMEM213A2RRL7 107 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 H3BTX0 84 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 K7EMT4 169 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 LGALS9O00182 355 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 SLC17A3O00476 420 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 IFNA1P01562 189 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 SNRPCP09234 159 aaKnown RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 SFTA3P0C7M3 94 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 HIST1H1EP10412 219 aaKnown RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 ZP3P21754 424 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 HOXD3P31249 432 aaPredicted RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 PCP4P48539 62 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 PPT1P50897 306 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 UBE2G2P60604 165 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 MEF2BQ02080 365 aaPredicted RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 KLF5Q13887 457 aaPredicted RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 PEA15Q15121 130 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 C16orf54Q6UWD8 224 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 ADAMTSL5Q6ZMM2 481 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 CYB561D1Q8N8Q1 229 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 STXBP6Q8NFX7 210 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 CITED2Q99967 270 aaPredicted RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 SMDT1Q9H4I9 107 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 TREM1Q9NP99 234 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 TMEM167BQ9NRX6 74 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 VAX2Q9UIW0 290 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 CARHSP1Q9Y2V2 147 aaKnown RBP4.75□□□□□ -1.65
LINC00643-203ENST00000555518 TENM1Q9UKZ4 2725 aa4.75□□□□□ -1.65
LINC00643-203ENST00000555518 IGHV3-49A0A0A0MS15 119 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 IGHV7-4-1A0A0J9YVY3 117 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 C11orf94C9JXX5 98 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 LINC01619G3V211 115 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 TMEM250H0YL14 139 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 NBEAP1P0C6P0 100 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 TAGLN2P37802 199 aaKnown RBP4.74□□□□□ -1.65
LINC00643-203ENST00000555518 RPEL1Q2QD12 228 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 C1orf194Q5T5A4 169 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 SIGLEC15Q6ZMC9 328 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 BPIFA4PQ86YQ2 179 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 IQCF2Q8IXL9 164 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 KLHL30-AS1Q8NEE0 82 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 OR11H1Q8NG94 326 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 C11orf52Q96A22 123 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 DUX3Q96PT4 197 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 METTL26Q96S19 204 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 TXNDC17Q9BRA2 123 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 C20orf24Q9BUV8 137 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 EIF5A2Q9GZV4 153 aaKnown RBP4.74□□□□□ -1.65
LINC00643-203ENST00000555518 SLC35B3Q9H1N7 401 aa4.74□□□□□ -1.65
LINC00643-203ENST00000555518 DAZ1Q9NQZ3 744 aaKnown RBP4.74□□□□□ -1.65
LINC00643-203ENST00000555518 TSSC4Q9Y5U2 329 aaPredicted RBP4.74□□□□□ -1.65
LINC00643-203ENST00000555518 TRRAPQ9Y4A5 3859 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 TRAV8-2A0A0B4J237 113 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 IGHV3-66A0A0C4DH42 116 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 A0A1B0GUS0 222 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 C2orf70A6NJV1 201 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 KRBOX1C9JBD0 128 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 J3KRW8 73 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 SOCS3O14543 225 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 CHEK1O14757 476 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 RPL7P18124 248 aaKnown RBP4.73□□□□□ -1.65
LINC00643-203ENST00000555518 S100A1P23297 94 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 SYNJ2BPP57105 145 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 PDE6HQ13956 83 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 FAM106AQ4KMX7 169 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 TMEM88Q6PEY1 159 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 OR4F17Q8NGA8 305 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 OR1N2Q8NGR9 330 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 C2CD4CQ8TF44 421 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 BLNKQ8WV28 456 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 DLX4Q92988 240 aaPredicted RBP4.73□□□□□ -1.65
LINC00643-203ENST00000555518 OR4F4Q96R69 305 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 DERL1Q9BUN8 251 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 Q9H3A6 140 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 SMPXQ9UHP9 88 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 ANK2Q01484 3957 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 CMYA5Q8N3K9 4069 aa4.73□□□□□ -1.65
LINC00643-203ENST00000555518 TRBV20OR9-2A0A075B6H5 130 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 ZNF320A2RRD8 509 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 F6UZH7 168 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 PDE6DO43924 150 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 ZNF253O75346 499 aa4.72□□□□□ -1.65
LINC00643-203ENST00000555518 CSN3P07498 182 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms