RNA–Protein interactions for RNA: ENST00000555015.5

SRP54-AS1-202, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-202ENST00000555015 RPP25LQ8N5L8 163 aaKnown RBP9.42□□□□□ -0.9
SRP54-AS1-202ENST00000555015 OR8A1Q8NGG7 326 aa9.42□□□□□ -0.9
SRP54-AS1-202ENST00000555015 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
SRP54-AS1-202ENST00000555015 ZNF503Q96F45 646 aa9.42□□□□□ -0.9
SRP54-AS1-202ENST00000555015 AAMDCQ9H7C9 122 aa9.42□□□□□ -0.9
SRP54-AS1-202ENST00000555015 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
SRP54-AS1-202ENST00000555015 A0A1B0GVG6 124 aa9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 CNN1P51911 297 aaKnown RBP9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
SRP54-AS1-202ENST00000555015 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 STAG3L2P0CL84 134 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 STAG3L3P0CL85 134 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 AKR1C8PQ5T2L2 129 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 LYPD1Q8N2G4 141 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 PHYHIPLQ96FC7 376 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 ZNF471Q9BX82 626 aaPredicted RBP9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 ACTR3CQ9C0K3 210 aaPredicted RBP9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 EDA2RQ9HAV5 297 aa9.4□□□□□ -0.9
SRP54-AS1-202ENST00000555015 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ARL14EPLP0DKL9 152 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 LGALSLQ3ZCW2 172 aaPredicted RBP9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 EXOC3-AS1Q8N2X6 119 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 OR10J6PQ8NGY7 276 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 STOML3Q8TAV4 291 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 RARRES2Q99969 163 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 SLC35B3Q9H1N7 401 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CSMD3Q7Z407 3707 aa9.39□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CTXND1A0A1B0GTU2 59 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 PRAC2D3DTV9 90 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 BOLA2-SMG1P6H3BVE0 249 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 M0R3E3 92 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 HMGB3O15347 200 aaKnown RBP9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CXorf1O96002 111 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 AMBPP02760 352 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 SEC11BP0C7V7 166 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 TPT1P13693 172 aaKnown RBP9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ICAM4Q14773 271 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 Q9H3A6 140 aa9.38□□□□□ -0.91
SRP54-AS1-202ENST00000555015 NPIPB6E9PJ23 425 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 FXYD7P58549 80 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CD300CQ08708 224 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ZFP69Q49AA0 526 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 SSX7Q7RTT5 188 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 BAP18Q8IXM2 172 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 PPP1R14DQ9NXH3 145 aa9.37□□□□□ -0.91
SRP54-AS1-202ENST00000555015 UMAD1C9J7I0 102 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 INSP01308 110 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 PRB4P10163 310 aaPredicted RBP9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 GCHFRP30047 84 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CSN1S1P47710 185 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ZNF726P1Q15940 193 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 SPINK13Q1W4C9 94 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 FAM74A1Q5RGS3 127 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 IGF2BP2-AS1Q96M15 143 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ODF3Q96PU9 254 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 TMEM167BQ9NRX6 74 aa9.36□□□□□ -0.91
SRP54-AS1-202ENST00000555015 A0A0J9YWU9 116 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 M0R2Z0 102 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 MIFP14174 115 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 TSPOP30536 169 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CDKN1BP46527 198 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 DPPA3Q6W0C5 159 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 ARL6IP6Q8N6S5 226 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 RXFP4Q8TDU9 374 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 X6R8D5 127 aa9.35□□□□□ -0.91
SRP54-AS1-202ENST00000555015 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 MAP1LC3B2A6NCE7 125 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 CRXO43186 299 aaPredicted RBP9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 C9orf47Q6ZRZ4 202 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 SLC51BQ86UW2 128 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 Q8NAQ8 132 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 TMED6Q8WW62 240 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 LINC00477Q96M19 166 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 NEU1Q99519 415 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 MAP1LC3BQ9GZQ8 125 aa9.34□□□□□ -0.91
SRP54-AS1-202ENST00000555015 IGKV2-40A0A087WW87 121 aaPredicted RBP9.33□□□□□ -0.92
SRP54-AS1-202ENST00000555015 PGPA6NDG6 321 aa9.33□□□□□ -0.92
SRP54-AS1-202ENST00000555015 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
SRP54-AS1-202ENST00000555015 IGKV2D-40P01614 121 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms