RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 C5orf17Q8NAS9 161 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 BLNKQ8WV28 456 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 NAGKQ9UJ70 344 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 H3BTX0 84 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 ZNF253O75346 499 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 GALR1P47211 349 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 TFPI2P48307 235 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 FOXL1Q12952 345 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 USMG5Q96IX5 58 aa6.84□□□□□ -1.31
TDP1-210ENST00000554976 PGPA6NDG6 321 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 APOHP02749 345 aaPredicted RBP6.84□□□□□ -1.32
TDP1-210ENST00000554976 TRGV3P03979 118 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 GNG4P50150 75 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 FAM231DQ6ZW35 169 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 EXOC3-AS1Q8N2X6 119 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 SRD5A3Q9H8P0 318 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 RABAC1Q9UI14 185 aa6.84□□□□□ -1.32
TDP1-210ENST00000554976 XKRY2A2RUG3 117 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 HOXA3O43365 443 aaPredicted RBP6.83□□□□□ -1.32
TDP1-210ENST00000554976 FMC1Q96HJ9 113 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 OSTCQ9NRP0 149 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 H7BYZ3 331 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 S100A7P31151 101 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 TMEM75Q8N9X5 138 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 RNF24Q9Y225 148 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 MED13LQ71F56 2210 aa6.83□□□□□ -1.32
TDP1-210ENST00000554976 TRAV34A0A0B4J273 112 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 C19orf71A6NCJ1 209 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 BMPR1BO00238 502 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 CD5LO43866 347 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 SCGB1D1O95968 90 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 RAB9AP51151 201 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 TPPP2P59282 170 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 RPL15P61313 204 aaKnown RBP6.82□□□□□ -1.32
TDP1-210ENST00000554976 BATFQ16520 125 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 C10orf99Q6UWK7 81 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 COX8CQ7Z4L0 72 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 Q86TA4 180 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 OR10G8Q8NGN5 311 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 MXRA5Q9NR99 2828 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 DIRC3C9JPN6 131 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 SCGB2A1O75556 95 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 SLC25A5P05141 298 aaKnown RBP6.82□□□□□ -1.32
TDP1-210ENST00000554976 CNN1P51911 297 aaKnown RBP6.82□□□□□ -1.32
TDP1-210ENST00000554976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 LINC00322Q6ZN03 302 aaPredicted RBP6.82□□□□□ -1.32
TDP1-210ENST00000554976 OR4F17Q8NGA8 305 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 WIPF2Q8TF74 440 aaPredicted RBP6.82□□□□□ -1.32
TDP1-210ENST00000554976 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 SMIM27A0A1W2PRY6 76 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 NDUFA4O00483 81 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 OCIAD2Q56VL3 154 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 UNQ9165/PRO28630Q6UXU0 137 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 TMEM86BQ8N661 226 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 PRSS22Q9GZN4 317 aa6.82□□□□□ -1.32
TDP1-210ENST00000554976 TRAV9-1A0A075B6T8 112 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 TRAV8-2A0A0B4J237 113 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 GPHB5Q86YW7 130 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 SIGLECL1Q8N7X8 197 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 RNASE7Q9H1E1 156 aaKnown RBP6.81□□□□□ -1.32
TDP1-210ENST00000554976 ITPR3Q14573 2671 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 FAM208BQ5VWN6 2430 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 POLQO75417 2590 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 M0QZ24 198 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 RPL7P18124 248 aaKnown RBP6.81□□□□□ -1.32
TDP1-210ENST00000554976 ARL3P36405 182 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 ACTL10Q5JWF8 245 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 LCNL1Q6ZST4 164 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 ZNF738Q8NE65 137 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 OR4C5Q8NGB2 326 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 GPR82Q96P67 336 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 ZNF331Q9NQX6 463 aaPredicted RBP6.81□□□□□ -1.32
TDP1-210ENST00000554976 SERTAD4Q9NUC0 356 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 ZNF492Q9P255 531 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 COX11Q9Y6N1 276 aa6.81□□□□□ -1.32
TDP1-210ENST00000554976 SOCS3O14543 225 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 WDR73Q6P4I2 378 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 NHLRC2Q8NBF2 726 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 IGHV3OR16-8A0A075B7F1 116 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 IGHV3-35A0A0C4DH35 117 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 FAM3BP58499 235 aaPredicted RBP6.8□□□□□ -1.32
TDP1-210ENST00000554976 PSG3Q16557 428 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 IL17RELQ6ZVW7 336 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 OR4X2Q8NGF9 303 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 CST9LQ9H4G1 147 aa6.8□□□□□ -1.32
TDP1-210ENST00000554976 SPTAN1Q13813 2472 aaKnown RBP6.8□□□□□ -1.32
TDP1-210ENST00000554976 PSG9Q00887 426 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 ZNF575Q86XF7 245 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 STPG4Q8N801 248 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 TMEM160Q9NX00 188 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 TEX15Q9BXT5 2789 aa6.79□□□□□ -1.32
TDP1-210ENST00000554976 GCN1Q92616 2671 aaKnown RBP6.79□□□□□ -1.32
TDP1-210ENST00000554976 SMAD7O15105 426 aaKnown RBP6.79□□□□□ -1.32
TDP1-210ENST00000554976 FOXE3Q13461 319 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms