RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 IGKCP01834 107 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 RBP4P02753 201 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 WFDC3Q8IUB2 231 aa12.4□□□□□ -0.42
SYNE3-203ENST00000554873 PLCE1Q9P212 2302 aa12.39□□□□□ -0.43
SYNE3-203ENST00000554873 ARL3P36405 182 aa12.39□□□□□ -0.43
SYNE3-203ENST00000554873 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
SYNE3-203ENST00000554873 SEM1Q6ZVN7 128 aa12.39□□□□□ -0.43
SYNE3-203ENST00000554873 RBMXL3Q8N7X1 1067 aaKnown RBP12.39□□□□□ -0.43
SYNE3-203ENST00000554873 CCL13Q99616 98 aa12.39□□□□□ -0.43
SYNE3-203ENST00000554873 Q9H3A6 140 aa12.39□□□□□ -0.43
SYNE3-203ENST00000554873 HIST1H4GQ99525 98 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 CITED1Q99966 193 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
SYNE3-203ENST00000554873 SRD5A1P18405 259 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 GLRXP35754 106 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 FAM104BQ5XKR9 115 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 TMEM158Q8WZ71 300 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 CARD19Q96LW7 228 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 GAFA1Q96PS6 74 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 RNF7Q9UBF6 113 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 PRNTQ86SH4 94 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 FAM216BQ8N7L0 139 aa12.38□□□□□ -0.43
SYNE3-203ENST00000554873 TRAV8-1A0A0A6YYK1 113 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 TMEM262E9PQX1 116 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 TEN1Q86WV5 123 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 FLYWCH2Q96CP2 140 aaKnown RBP12.37□□□□□ -0.43
SYNE3-203ENST00000554873 RPUSD1Q9UJJ7 312 aaKnown RBP12.37□□□□□ -0.43
SYNE3-203ENST00000554873 TRAV17A0A0B4J275 112 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 RHODO00212 210 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
SYNE3-203ENST00000554873 NPIPB3Q92617 1050 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 TPPP3Q9BW30 176 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 LINC00574Q9H8X3 128 aa12.37□□□□□ -0.43
SYNE3-203ENST00000554873 IGKV1D-37A0A075B6S9 117 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 FABP5P3A8MUU1 101 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 DPM2O94777 84 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 GATA4P43694 442 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 IGLV3-9A0A075B6K5 115 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 E7EUB6 86 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 WT1P19544 449 aaPredicted RBP12.36□□□□□ -0.43
SYNE3-203ENST00000554873 FCER1GP30273 86 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 ZNF474Q6S9Z5 364 aaPredicted RBP12.36□□□□□ -0.43
SYNE3-203ENST00000554873 MAPKAPK5-AS1Q8N8E1 139 aa12.36□□□□□ -0.43
SYNE3-203ENST00000554873 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
SYNE3-203ENST00000554873 TRBV7-3A0A075B6L6 115 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 ZNF785A8K8V0 405 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 IGLV2-11P01706 119 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 PRSS1P07477 247 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 NDUFV3P56181 108 aaKnown RBP12.35□□□□□ -0.43
SYNE3-203ENST00000554873 DIAPH2-AS1Q14236 149 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 THAP8Q8NA92 274 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 CFAP47Q6ZTR5 3102 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 RAI1Q7Z5J4 1906 aaPredicted RBP12.35□□□□□ -0.43
SYNE3-203ENST00000554873 CCDC179H3BU77 68 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 IL4P05112 153 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 ORM2P19652 201 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 ERHP84090 104 aaKnown RBP12.35□□□□□ -0.43
SYNE3-203ENST00000554873 MRPL51Q4U2R6 128 aaKnown RBP12.35□□□□□ -0.43
SYNE3-203ENST00000554873 NDUFA4L2Q9NRX3 87 aa12.35□□□□□ -0.43
SYNE3-203ENST00000554873 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
SYNE3-203ENST00000554873 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
SYNE3-203ENST00000554873 TWIST1Q15672 202 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 GP9P14770 177 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 PTH2Q96A98 100 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
SYNE3-203ENST00000554873 OTORQ9NRC9 128 aa12.34□□□□□ -0.43
SYNE3-203ENST00000554873 A0A087WX48 190 aa12.33□□□□□ -0.43
SYNE3-203ENST00000554873 LINC01619G3V211 115 aa12.33□□□□□ -0.43
SYNE3-203ENST00000554873 H3BTX0 84 aa12.33□□□□□ -0.43
SYNE3-203ENST00000554873 TM4SF5O14894 197 aa12.33□□□□□ -0.43
SYNE3-203ENST00000554873 IGHV3-48P01763 117 aa12.33□□□□□ -0.43
SYNE3-203ENST00000554873 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.43
SYNE3-203ENST00000554873 SPANXA1Q9NS26 97 aa12.33□□□□□ -0.43
SYNE3-203ENST00000554873 MBD3L4A6NDZ8 208 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-203ENST00000554873 MBD3L3A6NE82 208 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-203ENST00000554873 MBD3L5A6NJ08 208 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-203ENST00000554873 ATP5LO75964 103 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 NPYP01303 97 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 HOXB4P17483 251 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-203ENST00000554873 GOLT1AQ6ZVE7 132 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 MBD3L2Q8NHZ7 208 aaPredicted RBP12.33□□□□□ -0.44
SYNE3-203ENST00000554873 NAV3Q8IVL0 2385 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 DYSFO75923 2080 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 TMEM213A2RRL7 107 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 TMEM8BA6NDV4 472 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 J3KRW8 73 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 CKS2P33552 79 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 PSMB2P49721 201 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 GAGE2BQ13066 116 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 GAGE2EQ4V326 116 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 ZNF833PQ6ZTB9 187 aa12.33□□□□□ -0.44
SYNE3-203ENST00000554873 GAGE2DQ9UEU5 116 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms