RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 NBEAL2Q6ZNJ1 2754 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 ZNF320A2RRD8 509 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 HELTA6NFD8 242 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 GNG7O60262 68 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 SCGB2A1O75556 95 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 CRYBB3P26998 211 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
SHMT2-214ENST00000554604 LYZP61626 148 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 S100A7AQ86SG5 101 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 Q8N1Y9 231 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 OR2K2Q8NGT1 345 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 OCC1Q8TAD7 63 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 VN1R17PQ8TDU5 208 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 ZMAT4Q9H898 229 aa9.39□□□□□ -0.91
SHMT2-214ENST00000554604 IZUMO1RA6ND01 250 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 LGALS9O00182 355 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 CLEC3BP05452 202 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 TAS2R60P59551 318 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 KCNIP4Q6PIL6 250 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 GPHB5Q86YW7 130 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-214ENST00000554604 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
SHMT2-214ENST00000554604 PGPEP1LA6NFU8 196 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 F8W735 103 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-214ENST00000554604 H3BRN7 92 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 GPR183P32249 361 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 GNG4P50150 75 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-214ENST00000554604 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 OR10G8Q8NGN5 311 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 IGF2BP2-AS1Q96M15 143 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 RCHY1Q96PM5 261 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 SHANK2-AS3Q9BTD1 123 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-214ENST00000554604 SRD5A3Q9H8P0 318 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 RNF24Q9Y225 148 aa9.37□□□□□ -0.91
SHMT2-214ENST00000554604 C5orf52A6NGY3 159 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 K7EN84 100 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 PEX7O00628 323 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 TYMSP04818 313 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 S100A6P06703 90 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 HIST1H1EP10412 219 aaKnown RBP9.36□□□□□ -0.91
SHMT2-214ENST00000554604 CNN1P51911 297 aaKnown RBP9.36□□□□□ -0.91
SHMT2-214ENST00000554604 DEFB114Q30KQ6 69 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 Q56UQ5 140 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 ZNF502Q8TBZ5 544 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 GAR1Q9NY12 217 aaKnown RBP9.36□□□□□ -0.91
SHMT2-214ENST00000554604 SELENOKQ9Y6D0 94 aa9.36□□□□□ -0.91
SHMT2-214ENST00000554604 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 A8MZ25 164 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 GCGP01275 180 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
SHMT2-214ENST00000554604 CBLN1P23435 193 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 ATP6V0BQ99437 205 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 C19orf73Q9NVV2 129 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 EPDR1Q9UM22 224 aa9.35□□□□□ -0.91
SHMT2-214ENST00000554604 TMEM213A2RRL7 107 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 PGPA6NDG6 321 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 A8MWP6 167 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 UBE2CO00762 179 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 IL4P05112 153 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
SHMT2-214ENST00000554604 EDN2P20800 178 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 S100A7P31151 101 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 RANP62826 216 aaKnown RBP9.34□□□□□ -0.91
SHMT2-214ENST00000554604 TMEM183BQ1AE95 376 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 OTORQ9NRC9 128 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
SHMT2-214ENST00000554604 A0A1W2PPQ1 181 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 ZNF785A8K8V0 405 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 ISLRO14498 428 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 PHOX2AO14813 284 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 TRGC2P03986 189 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 CTSGP08311 255 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 FAM3BP58499 235 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-214ENST00000554604 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
SHMT2-214ENST00000554604 USF2Q15853 346 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-214ENST00000554604 TM4SF20Q53R12 229 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 LYPD1Q8N2G4 141 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 ATG101Q9BSB4 218 aa9.33□□□□□ -0.92
SHMT2-214ENST00000554604 Q9H3A6 140 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms