RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 RASL11BQ9BPW5 248 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 IGHV7-81A0A0B4J1V7 117 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 G3V4G9 280 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 FAM106CPP0CH98 169 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 ZNF562Q6V9R5 426 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 TRGV9Q99603 122 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 TMUB1Q9BVT8 246 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 FANCD2OSQ96PS1 177 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 hDV102S1A0JD36 115 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 KRTAP10-9P60411 292 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 FXYD5Q96DB9 178 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
SHMT2-212ENST00000554467 ITPR2Q14571 2701 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 G3V318 75 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 EGR2P11161 476 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-212ENST00000554467 LY6EQ16553 131 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
SHMT2-212ENST00000554467 GDF5OSQ5U4N7 250 aa9.16□□□□□ -0.94
SHMT2-212ENST00000554467 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
SHMT2-212ENST00000554467 URB1-AS1Q96HZ7 61 aa9.16□□□□□ -0.94
SHMT2-212ENST00000554467 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-212ENST00000554467 MYO9AB2RTY4 2548 aa9.16□□□□□ -0.94
SHMT2-212ENST00000554467 ATP6V0E1O15342 81 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 PAX8Q06710 450 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 C7orf69Q9H7B7 122 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 IL4P05112 153 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 EBI3Q14213 229 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 ZNF331Q9NQX6 463 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-212ENST00000554467 HIGD1AQ9Y241 93 aa9.15□□□□□ -0.94
SHMT2-212ENST00000554467 OOSP1A8MZH6 123 aa9.15□□□□□ -0.95
SHMT2-212ENST00000554467 VWC2LB2RUY7 222 aa9.15□□□□□ -0.95
SHMT2-212ENST00000554467 GNG7O60262 68 aa9.15□□□□□ -0.95
SHMT2-212ENST00000554467 COX6B1P14854 86 aa9.15□□□□□ -0.95
SHMT2-212ENST00000554467 UFSP1Q6NVU6 142 aa9.15□□□□□ -0.95
SHMT2-212ENST00000554467 C11orf52Q96A22 123 aa9.15□□□□□ -0.95
SHMT2-212ENST00000554467 IGLV11-55A0A075B6I3 123 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 A0A087X0K7 114 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 AVPP01185 164 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 MT-ND6P03923 174 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 UBE2G1P62253 170 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 PRSS57Q6UWY2 283 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 ASCL2Q99929 193 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 HIF1ANQ9NWT6 349 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 ITPR3Q14573 2671 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 C9JCJ5 164 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 M0R2Z0 102 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 APCSP02743 223 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 SLC25A5P05141 298 aaKnown RBP9.14□□□□□ -0.95
SHMT2-212ENST00000554467 Q5PR19 223 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 WDR73Q6P4I2 378 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 ZNF329Q86UD4 541 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 OR1N2Q8NGR9 330 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 C17orf77Q96MU5 243 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-212ENST00000554467 IGHV1-69DA0A0B4J2H0 117 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 ISLRO14498 428 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 IGHV1-69P01742 117 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 AMY1AP04745 511 aa9.14□□□□□ -0.95
SHMT2-212ENST00000554467 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
SHMT2-212ENST00000554467 NF1P21359 2839 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 A0A1W2PRE2 83 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 PGPA6NDG6 321 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-212ENST00000554467 HIST2H2BCQ6DN03 193 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 SMIM27A0A1W2PRY6 76 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 OR4C46A6NHA9 309 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 GP9P14770 177 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 TCF24Q7RTU0 167 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
SHMT2-212ENST00000554467 NPIPB5A8MRT5 1133 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 CD5LO43866 347 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 MSMBP08118 114 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 FCGR2BP31994 310 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 Q71RC1 249 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 CHRDL1Q9BU40 450 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 C1RLQ9NZP8 487 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 SETD2Q9BYW2 2564 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 FLNAP21333 2647 aaKnown RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 ACANP16112 2415 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 FAM231BA6NCW3 169 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 H0Y8G0 127 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 BMI1P35226 326 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 TTC9CQ8N5M4 171 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 C21orf62Q9NYP8 219 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 LY96Q9Y6Y9 160 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-212ENST00000554467 ZNF491Q8N8L2 437 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 PIFOQ8TCI5 191 aa9.12□□□□□ -0.95
SHMT2-212ENST00000554467 PEX7O00628 323 aa9.11□□□□□ -0.95
SHMT2-212ENST00000554467 CRXO43186 299 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-212ENST00000554467 HSBP1O75506 76 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms