RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 IGFL4Q6B9Z1 124 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 RPUSD4Q96CM3 377 aaKnown RBP7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 FAM210BQ96KR6 192 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 SLC25A31Q9H0C2 315 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 SLC39A9Q9NUM3 307 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 PXMP4Q9Y6I8 212 aa7.44□□□□□ -1.22
PTCD2P1-201ENST00000554393 VPS13DQ5THJ4 4388 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 M0R2Z0 102 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 ZNF253O75346 499 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 TSPOP30536 169 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 EMP1P54849 157 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 HIST1H1AQ02539 215 aaPredicted RBP7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 MORN5Q5VZ52 161 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 TMEM256Q8N2U0 113 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 RNF141Q8WVD5 230 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 SAT2Q96F10 170 aaPredicted RBP7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 NIPSNAP3BQ9BS92 247 aa7.43□□□□□ -1.22
PTCD2P1-201ENST00000554393 DNAH6Q9C0G6 4158 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 FGF7P21781 194 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 RHOBP62745 196 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 ZNF767PQ75MW2 155 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 BAP18Q8IXM2 172 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 NPCDR1Q9BY65 106 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 KCNIP2Q9NS61 270 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 PPP1R14DQ9NXH3 145 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 TMEM14CQ9P0S9 112 aa7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 YTHDF2Q9Y5A9 579 aaKnown RBP7.42□□□□□ -1.22
PTCD2P1-201ENST00000554393 LYRM9A8MSI8 78 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 H3BQ15 152 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 SLC17A3O00476 420 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 SIX6O95475 246 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 PET100P0DJ07 73 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 CDKN1BP46527 198 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 H2BFSP57053 126 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 NHLH2Q02577 135 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 PDE6HQ13956 83 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 OR5C1Q8NGR4 320 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 OR10J6PQ8NGY7 276 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 MRPL53Q96EL3 112 aaKnown RBP7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 C20orf144Q9BQM9 153 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 OR5AC2Q9NZP5 309 aa7.41□□□□□ -1.22
PTCD2P1-201ENST00000554393 TRAV5A0A0B4J249 113 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 H0YIZ8 118 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 TAS2R60P59551 318 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 LRRC37A5PQ49AS3 106 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 PPP1R1CQ8WVI7 109 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 ODF3Q96PU9 254 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 ZNF586Q9NXT0 402 aa7.4□□□□□ -1.22
PTCD2P1-201ENST00000554393 HERC1Q15751 4861 aa7.4□□□□□ -1.23
PTCD2P1-201ENST00000554393 TRBV19A0A075B6N1 114 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 TRAV12-2A0A075B6T6 113 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 ZNF705GA8MUZ8 300 aaPredicted RBP7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 H7BYZ3 331 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 SSNA1O43805 119 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 SNRPCP09234 159 aaKnown RBP7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 P0DMU3 169 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 FAM231AP0DMU4 169 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 FAM231CP0DMU5 169 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 HIST1H1EP10412 219 aaKnown RBP7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 DAD1P61803 113 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 ZNF493Q6ZR52 646 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 WDR61Q9GZS3 305 aaKnown RBP7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 PRELID1Q9Y255 219 aa7.39□□□□□ -1.23
PTCD2P1-201ENST00000554393 PLAC8L1A1L4L8 177 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 PRAC2D3DTV9 90 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 NPIPB6E9PJ23 425 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 C17orf112F2Z3M2 114 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 H3BTX0 84 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 MPC2O95563 127 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 CLINT1Q14677 625 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 THAP6Q8TBB0 222 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 TMEM263Q8WUH6 116 aaKnown RBP7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 C16orf74Q96GX8 76 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 LINC01587Q99440 93 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 ATP5SQ99766 215 aa7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
PTCD2P1-201ENST00000554393 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 NDUFB4O95168 129 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 LEPP41159 167 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 GCSAMLQ5JQS6 135 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 GFI1BQ5VTD9 330 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 POM121L12Q8N7R1 296 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 FAM167A-AS1Q96KT0 104 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 SLC25A2Q9BXI2 301 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 HSPB11Q9Y547 144 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 TIMM9Q9Y5J7 89 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 DNAH10Q8IVF4 4471 aa7.37□□□□□ -1.23
PTCD2P1-201ENST00000554393 PTTG1O95997 202 aa7.36□□□□□ -1.23
PTCD2P1-201ENST00000554393 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
PTCD2P1-201ENST00000554393 PYYP10082 97 aa7.36□□□□□ -1.23
PTCD2P1-201ENST00000554393 AZU1P20160 251 aa7.36□□□□□ -1.23
PTCD2P1-201ENST00000554393 C15orf53Q8NAA6 179 aa7.36□□□□□ -1.23
PTCD2P1-201ENST00000554393 LINC00477Q96M19 166 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms