RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OOSP1A8MZH6 123 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 LIFP15018 202 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
SIX4-202ENST00000554079 MFAP4P55083 255 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 HERVK_113P63121 156 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 NDUFA11Q86Y39 141 aa7.51□□□□□ -1.21
SIX4-202ENST00000554079 C1orf162Q8NEQ5 155 aaPredicted RBP7.51□□□□□ -1.21
SIX4-202ENST00000554079 REV3LO60673 3130 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 IGHV3OR15-7A0A075B7D8 119 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 F5H768 121 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 ZFAND5O76080 213 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 TFF1P04155 84 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 CKS2P33552 79 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 CRIP2P52943 208 aaPredicted RBP7.5□□□□□ -1.21
SIX4-202ENST00000554079 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
SIX4-202ENST00000554079 LYZL1Q6UWQ5 148 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 THAP8Q8NA92 274 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
SIX4-202ENST00000554079 DCTN5Q9BTE1 182 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 AAMDCQ9H7C9 122 aa7.5□□□□□ -1.21
SIX4-202ENST00000554079 ZNF71Q9NQZ8 489 aaPredicted RBP7.5□□□□□ -1.21
SIX4-202ENST00000554079 TRAV2A0A0B4J234 112 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 SPINT2O43291 252 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 CRIP1P50238 77 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 HES1Q14469 280 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 C9orf153Q5TBE3 101 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 C3orf22Q8N5N4 141 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 PCNX2A6NKB5 2137 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 DSCAML1Q8TD84 2053 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 SPTY2D1-AS1A0A0U1RR47 76 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 H3BTX0 84 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 UPK2O00526 184 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 TIMM23O14925 209 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 CECR9P0C854 216 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 IGLC6P0CF74 106 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 PLNP26678 52 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 SSR4P51571 173 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 TNFAIP6P98066 277 aaPredicted RBP7.49□□□□□ -1.21
SIX4-202ENST00000554079 GOLT1AQ6ZVE7 132 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 GGNQ86UU5 652 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 EDA2RQ9HAV5 297 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
SIX4-202ENST00000554079 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
SIX4-202ENST00000554079 SPTBN5Q9NRC6 3674 aaKnown RBP7.48□□□□□ -1.21
SIX4-202ENST00000554079 IGLV3-12A0A075B6K2 115 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 A0A096LPE4 126 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 A0A1W2PPZ6 126 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 WNT9BO14905 357 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 IGHV3-9P01782 118 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 ORM2P19652 201 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 EFNA4P52798 201 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 B3GALT5-AS1P59052 145 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 ZNF672Q499Z4 452 aaPredicted RBP7.48□□□□□ -1.21
SIX4-202ENST00000554079 TEX36Q5VZQ5 186 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 TMEM219Q86XT9 240 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 POM121L12Q8N7R1 296 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 MYOZ3Q8TDC0 251 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 MRPL20Q9BYC9 149 aaKnown RBP7.48□□□□□ -1.21
SIX4-202ENST00000554079 SLC25A39Q9BZJ4 359 aaPredicted RBP7.48□□□□□ -1.21
SIX4-202ENST00000554079 METRNQ9UJH8 293 aa7.48□□□□□ -1.21
SIX4-202ENST00000554079 K7EM74 188 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 LGALS9O00182 355 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 CCL11P51671 97 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
SIX4-202ENST00000554079 EBI3Q14213 229 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 TMEM155Q4W5P6 130 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 PRR7Q8TB68 274 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 PLEKHB2Q96CS7 222 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 RNF185Q96GF1 192 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 NXT2Q9NPJ8 142 aaKnown RBP7.47□□□□□ -1.21
SIX4-202ENST00000554079 MRPL36Q9P0J6 103 aaKnown RBP7.47□□□□□ -1.21
SIX4-202ENST00000554079 VCANP13611 3396 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 DOCK7Q96N67 2140 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 RBAKDNA6NC62 111 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 C10orf142B7Z368 130 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 LINC01565O15544 149 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 CXCL13O43927 109 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 NDUFA3O95167 84 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 C10orf126Q8N4M7 172 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 TMEM75Q8N9X5 138 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 ASCL2Q99929 193 aa7.47□□□□□ -1.21
SIX4-202ENST00000554079 IGHV3-64DA0A0J9YX35 117 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 UQCRQO14949 82 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 MRPS12O15235 138 aaKnown RBP7.46□□□□□ -1.22
SIX4-202ENST00000554079 DUX1O43812 170 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 CFC1P0CG37 223 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 CCL3P10147 92 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 LOXL3P58215 753 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 TRPT1Q86TN4 253 aaKnown RBP7.46□□□□□ -1.22
SIX4-202ENST00000554079 PLXDC1Q8IUK5 500 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 DUX5Q96PT3 197 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 GNG12Q9UBI6 72 aa7.46□□□□□ -1.22
SIX4-202ENST00000554079 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms