RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 IBA57-AS1B1ANH7 110 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 SPINK4O60575 86 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 CDS2O95674 445 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 S100A7P31151 101 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 RCVRNP35243 200 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 MXD1Q05195 221 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 ZNF415Q09FC8 603 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 WFDC2Q14508 124 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 TWIST1Q15672 202 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 GGNBP1Q5YKI7 109 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 LGI3Q8N145 548 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 ST6GAL2Q96JF0 529 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 SLC35E1Q96K37 410 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 PYGO2Q9BRQ0 406 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 DNAJC4Q9NNZ3 241 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
ATXN3-224ENST00000554040 IGKV1OR2-108A0A075B7D4 117 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 IGHV3-38A0A0C4DH36 116 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 E5RGE8 158 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 K7EQD1 137 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 B3GALNT1O75752 331 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 IGHV3-53P01767 116 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 ORM2P19652 201 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 SRIP30626 198 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-224ENST00000554040 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
ATXN3-224ENST00000554040 MEF2DQ14814 521 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 LINC01620Q4KN68 170 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 STEAP1BQ6NZ63 245 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 THAP8Q8NA92 274 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 C11orf72Q8NBR9 251 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 GPX8Q8TED1 209 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 RBPMSQ93062 196 aaKnown RBP4.48□□□□□ -1.69
ATXN3-224ENST00000554040 RPUSD4Q96CM3 377 aaKnown RBP4.48□□□□□ -1.69
ATXN3-224ENST00000554040 TMEM147Q9BVK8 224 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 MRPL32Q9BYC8 188 aaKnown RBP4.48□□□□□ -1.69
ATXN3-224ENST00000554040 PARD6GQ9BYG4 376 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-224ENST00000554040 Q9HAA7 133 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 COPZ2Q9P299 210 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 CACFD1Q9UGQ2 172 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 SSR3Q9UNL2 185 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 TMEM56-RWDD3S4R434 201 aa4.48□□□□□ -1.69
ATXN3-224ENST00000554040 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 TRAV12-3A0A0B4J271 114 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 RPL7P18124 248 aaKnown RBP4.47□□□□□ -1.69
ATXN3-224ENST00000554040 GATA2P23769 480 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-224ENST00000554040 TNFSF8P32971 234 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 VAMP2P63027 116 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 LINC01556Q5JQF7 62 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 TMEM182Q6ZP80 229 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-224ENST00000554040 Q6ZRU5 148 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 CCDC190Q86UF4 302 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 LHFPL1Q86WI0 220 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 SELENOHQ8IZQ5 122 aaKnown RBP4.47□□□□□ -1.69
ATXN3-224ENST00000554040 ZNF680Q8NEM1 530 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 LHFPL5Q8TAF8 219 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 LRRC20Q8TCA0 184 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 ZNF431Q8TF32 576 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-224ENST00000554040 GLYATL2Q8WU03 294 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 TM2D2Q9BX73 214 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 TMEM222Q9H0R3 208 aa4.47□□□□□ -1.69
ATXN3-224ENST00000554040 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-224ENST00000554040 A0A087X0K7 114 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 TEX13DA0A0J9YY54 714 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-224ENST00000554040 H3BRN7 92 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 ANXA2RQ3ZCQ2 193 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 UBE2NLQ5JXB2 153 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 GPR107Q5VW38 600 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 IQCF2Q8IXL9 164 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 CCDC71LQ8N9Z2 235 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 BPIFCQ8NFQ6 507 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 ZFAND1Q8TCF1 268 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 DTD1Q8TEA8 209 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 VGLL1Q99990 258 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 SHANK2-AS3Q9BTD1 123 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 VCXQ9H320 206 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 KLF12Q9Y4X4 402 aa4.46□□□□□ -1.7
ATXN3-224ENST00000554040 RBFOX3A6NFN3 312 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 LECT2O14960 151 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 ORM1P02763 201 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 SULT1A3P0DMM9 295 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 SULT1A4P0DMN0 295 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 CT45A10P0DMU9 189 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 LEPP41159 167 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 TCL1AP56279 114 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 SUMO2P61956 95 aaKnown RBP4.45□□□□□ -1.7
ATXN3-224ENST00000554040 TMEM268Q5VZI3 342 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 EIF4E3Q8N5X7 224 aaKnown RBP4.45□□□□□ -1.7
ATXN3-224ENST00000554040 OR1S1Q8NH92 325 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 BLNKQ8WV28 456 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 PCNPQ8WW12 178 aaKnown RBP4.45□□□□□ -1.7
ATXN3-224ENST00000554040 TMEM37Q8WXS4 190 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 ODF3Q96PU9 254 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 TXNDC17Q9BRA2 123 aa4.45□□□□□ -1.7
ATXN3-224ENST00000554040 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms