RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 SLC35E1Q96K37 410 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 RNF2Q99496 336 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 SLC25A22Q9H936 323 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 TMEM167BQ9NRX6 74 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 TMEM213A2RRL7 107 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 XKRY2A2RUG3 117 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 NUPR2A6NF83 97 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 IFITM10A6NMD0 228 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 C15orf61A6NNL5 157 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 NPIPB5A8MRT5 1133 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 TSTD3H0UI37 97 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 H3BS24 57 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 UPK2O00526 184 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 HMGB3O15347 200 aaKnown RBP6.61□□□□□ -1.35
TDP1-208ENST00000553989 NDUFB8O95169 186 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 REG1AP05451 166 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 IL6RP08887 468 aaPredicted RBP6.61□□□□□ -1.35
TDP1-208ENST00000553989 GPX4P36969 197 aaPredicted RBP6.61□□□□□ -1.35
TDP1-208ENST00000553989 LBHQ53QV2 105 aaPredicted RBP6.61□□□□□ -1.35
TDP1-208ENST00000553989 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 GPHB5Q86YW7 130 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 OR1L6Q8NGR2 347 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 PACRGQ96M98 296 aaPredicted RBP6.61□□□□□ -1.35
TDP1-208ENST00000553989 OVOL2Q9BRP0 275 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 TMEM14BQ9NUH8 114 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 SLC45A2Q9UMX9 530 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 PXMP4Q9Y6I8 212 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
TDP1-208ENST00000553989 A0A0J9YWU9 116 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 A8MWP6 167 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 TEX22C9J3V5 150 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 C9JCJ5 164 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 PRSS46E5RG02 174 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 INS-IGF2F8WCM5 200 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 NDUFB4O95168 129 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 FABP4P15090 132 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 NPY1RP25929 384 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 GPR183P32249 361 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 SUB1P53999 127 aaKnown RBP eCLIP6.6□□□□□ -1.35
TDP1-208ENST00000553989 APOC4P55056 127 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 TAS2R45P59539 299 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 YPEL3P61236 119 aaPredicted RBP6.6□□□□□ -1.35
TDP1-208ENST00000553989 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
TDP1-208ENST00000553989 RPL8P62917 257 aaKnown RBP6.6□□□□□ -1.35
TDP1-208ENST00000553989 ACTL10Q5JWF8 245 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 TMEM144Q7Z5S9 345 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 LINC01551Q86U37 167 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 SLC24A4Q8NFF2 622 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 OR10G8Q8NGN5 311 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 OR5B3Q8NH48 314 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 OR4A5Q8NH83 315 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 OR51B2Q9Y5P1 312 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
TDP1-208ENST00000553989 TRBV7-1A0A0A6YYK4 115 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 IGHV3-35A0A0C4DH35 117 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 E7EUB6 86 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 CLEC3BP05452 202 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 NPPCP23582 126 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 GCHFRP30047 84 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 PAFAH1B2P68402 229 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.35
TDP1-208ENST00000553989 DEFB135Q30KP9 77 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 C2orf83Q53S99 150 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 OR1L8Q8NGR8 309 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 TMEM37Q8WXS4 190 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 C11orf52Q96A22 123 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 SFRP2Q96HF1 295 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 MGST2Q99735 147 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 BET1LQ9NYM9 111 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 THYN1Q9P016 225 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 KLK5Q9Y337 293 aaPredicted RBP6.59□□□□□ -1.35
TDP1-208ENST00000553989 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 U3KQE9 123 aa6.59□□□□□ -1.35
TDP1-208ENST00000553989 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 A0A1W2PPQ1 181 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 HELTA6NFD8 242 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 SPRY2O43597 315 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 CRYGCP07315 174 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 MYOD1P15172 320 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 BMI1P35226 326 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 CNN1P51911 297 aaKnown RBP6.58□□□□□ -1.36
TDP1-208ENST00000553989 PRCDQ00LT1 54 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 MIC13Q5XKP0 118 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
TDP1-208ENST00000553989 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 PQLC2Q6ZP29 291 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 GATAD1Q8WUU5 269 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 TMEM190Q8WZ59 177 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 MRPL27Q9P0M9 148 aaKnown RBP6.58□□□□□ -1.36
TDP1-208ENST00000553989 FUT9Q9Y231 359 aa6.58□□□□□ -1.36
TDP1-208ENST00000553989 IGLV11-55A0A075B6I3 123 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 TEX50A0A1B0GTY4 177 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 A0A1W2PRE2 83 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 OR10J4P0C629 311 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 LINC00869P0C866 280 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 ARL14EPLP0DKL9 152 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms