RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
FOXN3-204ENST00000553840 UBE2DNLQ8IWF7 75 aa12.59□□□□□ -0.39
FOXN3-204ENST00000553840 C20orf144Q9BQM9 153 aa12.59□□□□□ -0.39
FOXN3-204ENST00000553840 NMES1Q9C002 83 aa12.59□□□□□ -0.39
FOXN3-204ENST00000553840 TRAV5A0A0B4J249 113 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 H3BQ15 152 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 SLC17A3O00476 420 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 HTN1P15515 57 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 H2BFSP57053 126 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
FOXN3-204ENST00000553840 C16orf74Q96GX8 76 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 KMT2AQ03164 3969 aa12.58□□□□□ -0.4
FOXN3-204ENST00000553840 ZNF253O75346 499 aa12.57□□□□□ -0.4
FOXN3-204ENST00000553840 PRM2P04554 102 aa12.57□□□□□ -0.4
FOXN3-204ENST00000553840 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
FOXN3-204ENST00000553840 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
FOXN3-204ENST00000553840 MED28Q9H204 178 aa12.57□□□□□ -0.4
FOXN3-204ENST00000553840 H7BYZ3 331 aa12.56□□□□□ -0.4
FOXN3-204ENST00000553840 DEFB130BP0DP73 79 aa12.56□□□□□ -0.4
FOXN3-204ENST00000553840 DEFB130AP0DP74 79 aa12.56□□□□□ -0.4
FOXN3-204ENST00000553840 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
FOXN3-204ENST00000553840 NHLH2Q02577 135 aa12.56□□□□□ -0.4
FOXN3-204ENST00000553840 NPCDR1Q9BY65 106 aa12.56□□□□□ -0.4
FOXN3-204ENST00000553840 TMEM14CQ9P0S9 112 aa12.56□□□□□ -0.4
FOXN3-204ENST00000553840 AZU1P20160 251 aa12.55□□□□□ -0.4
FOXN3-204ENST00000553840 CCDC28AQ8IWP9 274 aa12.55□□□□□ -0.4
FOXN3-204ENST00000553840 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
FOXN3-204ENST00000553840 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
FOXN3-204ENST00000553840 ZNF586Q9NXT0 402 aa12.55□□□□□ -0.4
FOXN3-204ENST00000553840 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
FOXN3-204ENST00000553840 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
FOXN3-204ENST00000553840 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
FOXN3-204ENST00000553840 LEPP41159 167 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 PDE6HQ13956 83 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 FCN2Q15485 313 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 RNF212Q495C1 297 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 TMEM88Q6PEY1 159 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
FOXN3-204ENST00000553840 PPP1R1CQ8WVI7 109 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 OR5AC2Q9NZP5 309 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
FOXN3-204ENST00000553840 BIRC6Q9NR09 4857 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 TRBV19A0A075B6N1 114 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 C17orf112F2Z3M2 114 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 ATP5G1P05496 136 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 ATP5G3P48201 142 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 MRPL53Q96EL3 112 aaKnown RBP12.53□□□□□ -0.4
FOXN3-204ENST00000553840 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
FOXN3-204ENST00000553840 PLAC8L1A1L4L8 177 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 CBY3A6NI87 242 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 NPIPB6E9PJ23 425 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 H0YIZ8 118 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 PET100P0DJ07 73 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 CLINT1Q14677 625 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 GFI1BQ5VTD9 330 aa12.52□□□□□ -0.41
FOXN3-204ENST00000553840 F5H768 121 aa12.51□□□□□ -0.41
FOXN3-204ENST00000553840 MPC2O95563 127 aa12.51□□□□□ -0.41
FOXN3-204ENST00000553840 RNASE8Q8TDE3 154 aaKnown RBP12.51□□□□□ -0.41
FOXN3-204ENST00000553840 BLNKQ8WV28 456 aa12.51□□□□□ -0.41
FOXN3-204ENST00000553840 MRPL32Q9BYC8 188 aaKnown RBP12.51□□□□□ -0.41
FOXN3-204ENST00000553840 PARD6GQ9BYG4 376 aaPredicted RBP12.51□□□□□ -0.41
FOXN3-204ENST00000553840 WDR61Q9GZS3 305 aaKnown RBP12.51□□□□□ -0.41
FOXN3-204ENST00000553840 J3KRW8 73 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 M0R2N4 97 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 CT45A10P0DMU9 189 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 PYYP10082 97 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 LINC00477Q96M19 166 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
FOXN3-204ENST00000553840 NOP10Q9NPE3 64 aaKnown RBP12.5□□□□□ -0.41
FOXN3-204ENST00000553840 TRAV12-3A0A0B4J271 114 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
FOXN3-204ENST00000553840 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-204ENST00000553840 KIR3DS1Q14943 382 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 GCSAMLQ5JQS6 135 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 PYGO2Q9BRQ0 406 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 SLC25A2Q9BXI2 301 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 OR51M1Q9H341 326 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
FOXN3-204ENST00000553840 M0R3E3 92 aa12.48□□□□□ -0.41
FOXN3-204ENST00000553840 NDUFB4O95168 129 aa12.48□□□□□ -0.41
FOXN3-204ENST00000553840 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
FOXN3-204ENST00000553840 ATP5SQ99766 215 aa12.48□□□□□ -0.41
FOXN3-204ENST00000553840 NUDT3O95989 172 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 IFNA5P01569 189 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 NBEAP1P0C6P0 100 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 ICAM4Q14773 271 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 SCGB1C1Q8TD33 95 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 FUT9Q9Y231 359 aa12.47□□□□□ -0.41
FOXN3-204ENST00000553840 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 IGLV2-18A0A075B6J9 118 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 C7orf71A4D174 169 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 SOHLH1Q5JUK2 328 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 TMEM78Q5T7P6 136 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms