RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
SYNE2-211ENST00000553801 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
SYNE2-211ENST00000553801 ZNF680Q8NEM1 530 aa12.14□□□□□ -0.47
SYNE2-211ENST00000553801 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
SYNE2-211ENST00000553801 MCFD2Q8NI22 146 aa12.14□□□□□ -0.47
SYNE2-211ENST00000553801 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
SYNE2-211ENST00000553801 SSSCA1O60232 199 aa12.13□□□□□ -0.47
SYNE2-211ENST00000553801 NXPH4O95158 308 aa12.13□□□□□ -0.47
SYNE2-211ENST00000553801 UBE2MP61081 183 aaKnown RBP12.13□□□□□ -0.47
SYNE2-211ENST00000553801 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
SYNE2-211ENST00000553801 ZNF431Q8TF32 576 aaPredicted RBP12.13□□□□□ -0.47
SYNE2-211ENST00000553801 DEDD2Q8WXF8 326 aa12.13□□□□□ -0.47
SYNE2-211ENST00000553801 MRPS26Q9BYN8 205 aaKnown RBP12.13□□□□□ -0.47
SYNE2-211ENST00000553801 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
SYNE2-211ENST00000553801 COX7A2P2O60397 106 aa12.12□□□□□ -0.47
SYNE2-211ENST00000553801 METTL15P1P0C7V9 234 aa12.12□□□□□ -0.47
SYNE2-211ENST00000553801 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
SYNE2-211ENST00000553801 FUSP35637 526 aaKnown RBP eCLIP12.12□□□□□ -0.47
SYNE2-211ENST00000553801 TMEM14EPQ6UXP3 125 aa12.12□□□□□ -0.47
SYNE2-211ENST00000553801 BCL7BQ9BQE9 202 aa12.12□□□□□ -0.47
SYNE2-211ENST00000553801 FAT1Q14517 4588 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 TRAV9-2A0A087WT02 112 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 H3BTX0 84 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 SLC17A3O00476 420 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 PAX4O43316 350 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 CCNKO75909 580 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
SYNE2-211ENST00000553801 PYDC2Q56P42 97 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 ZBTB8BQ8NAP8 495 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-211ENST00000553801 TRIM63Q969Q1 353 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 GSN-AS1Q9NRJ2 163 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
SYNE2-211ENST00000553801 NPIPB6E9PJ23 425 aa12.1□□□□□ -0.47
SYNE2-211ENST00000553801 AGPAT2O15120 278 aa12.1□□□□□ -0.47
SYNE2-211ENST00000553801 ZNF324O75467 553 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-211ENST00000553801 TMBIM6P55061 237 aa12.1□□□□□ -0.47
SYNE2-211ENST00000553801 GUK1Q16774 197 aa12.1□□□□□ -0.47
SYNE2-211ENST00000553801 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
SYNE2-211ENST00000553801 SAT2Q96F10 170 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-211ENST00000553801 SLIRPQ9GZT3 109 aaKnown RBP12.1□□□□□ -0.47
SYNE2-211ENST00000553801 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
SYNE2-211ENST00000553801 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-211ENST00000553801 A0A087WTM6 91 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 C9orf170A2RU37 121 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 TAS2R30P59541 319 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 KRTAP10-1P60331 282 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 SLAQ13239 276 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 ICAM4Q14773 271 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 OPCMLQ14982 345 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 EIF4E3Q8N5X7 224 aaKnown RBP12.09□□□□□ -0.47
SYNE2-211ENST00000553801 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 LINC00467Q9BRT7 94 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 GGACTQ9BVM4 153 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
SYNE2-211ENST00000553801 C7orf71A4D174 169 aa12.08□□□□□ -0.48
SYNE2-211ENST00000553801 H3BQ15 152 aa12.08□□□□□ -0.48
SYNE2-211ENST00000553801 TSC22D2O75157 780 aa12.08□□□□□ -0.48
SYNE2-211ENST00000553801 ANXA2RQ3ZCQ2 193 aa12.08□□□□□ -0.48
SYNE2-211ENST00000553801 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
SYNE2-211ENST00000553801 DNAJC4Q9NNZ3 241 aa12.08□□□□□ -0.48
SYNE2-211ENST00000553801 FAM229AH3BQW9 127 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 K7EP13 123 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 SPINK4O60575 86 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 RAB31Q13636 194 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
SYNE2-211ENST00000553801 Q6ZRG5 221 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 ST6GAL2Q96JF0 529 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
SYNE2-211ENST00000553801 NOL3O60936 208 aaKnown RBP12.06□□□□□ -0.48
SYNE2-211ENST00000553801 SCGB1D2O95969 90 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 DNAH10OSP0CZ25 163 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 GCSHP23434 173 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 TCL1AP56279 114 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 MORN5Q5VZ52 161 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 LYPD5Q6UWN5 251 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 MRPL53Q96EL3 112 aaKnown RBP12.06□□□□□ -0.48
SYNE2-211ENST00000553801 LINC00477Q96M19 166 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 LY96Q9Y6Y9 160 aa12.06□□□□□ -0.48
SYNE2-211ENST00000553801 KLLNB2CW77 178 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 ZNF253O75346 499 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 MPDU1O75352 247 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 SMR3BP02814 79 aaPredicted RBP12.05□□□□□ -0.48
SYNE2-211ENST00000553801 OR4E1P0C645 316 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 NEGR1Q7Z3B1 354 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 OR1L4Q8NGR5 311 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 MGST2Q99735 147 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 HHLA3Q9XRX5 114 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 KLF12Q9Y4X4 402 aa12.05□□□□□ -0.48
SYNE2-211ENST00000553801 RNASE4P34096 147 aaKnown RBP12.04□□□□□ -0.48
SYNE2-211ENST00000553801 CAMLGP49069 296 aa12.04□□□□□ -0.48
SYNE2-211ENST00000553801 ARL16Q0P5N6 197 aa12.04□□□□□ -0.48
SYNE2-211ENST00000553801 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
SYNE2-211ENST00000553801 IBA57Q5T440 356 aaKnown RBP12.04□□□□□ -0.48
SYNE2-211ENST00000553801 MSRB1Q9NZV6 116 aa12.04□□□□□ -0.48
SYNE2-211ENST00000553801 MDFICQ9P1T7 246 aa12.04□□□□□ -0.48
SYNE2-211ENST00000553801 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
SYNE2-211ENST00000553801 IGHV3-53P01767 116 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms