RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
LINC00643-202ENST00000553426 C2orf50Q96LR7 162 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 H3BTX0 84 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 H2AFB2P0C5Z0 115 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 MED14OSP0DP75 135 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 SULT1A1P50225 295 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 S100A10P60903 97 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 BAXQ07812 192 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 MIC13Q5XKP0 118 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 CCDC32Q9BV29 185 aa8.98□□□□□ -0.97
LINC00643-202ENST00000553426 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
LINC00643-202ENST00000553426 FAM240BA0A1B0GVZ2 78 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 PLAC8L1A1L4L8 177 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 FAM24AA6NFZ4 105 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 IGLC2P0DOY2 106 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 PRB4P10163 310 aaPredicted RBP8.97□□□□□ -0.97
LINC00643-202ENST00000553426 LEPP41159 167 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 CLINT1Q14677 625 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 SEC22CQ9BRL7 303 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 LYRM2Q9NU23 88 aaPredicted RBP8.97□□□□□ -0.97
LINC00643-202ENST00000553426 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
LINC00643-202ENST00000553426 UBE2L5PA0A1B0GUS4 154 aa8.96□□□□□ -0.98
LINC00643-202ENST00000553426 SLC17A3O00476 420 aa8.96□□□□□ -0.98
LINC00643-202ENST00000553426 RPL29P47914 159 aaKnown RBP8.96□□□□□ -0.98
LINC00643-202ENST00000553426 ATP6V1FQ16864 119 aa8.96□□□□□ -0.98
LINC00643-202ENST00000553426 MZT2BQ6NZ67 158 aa8.96□□□□□ -0.98
LINC00643-202ENST00000553426 RNASE8Q8TDE3 154 aaKnown RBP8.96□□□□□ -0.98
LINC00643-202ENST00000553426 ODF3Q96PU9 254 aa8.96□□□□□ -0.98
LINC00643-202ENST00000553426 SLC39A9Q9NUM3 307 aa8.96□□□□□ -0.98
LINC00643-202ENST00000553426 TRAV5A0A0B4J249 113 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 PRAC2D3DTV9 90 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 H3BQ15 152 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 ZNF253O75346 499 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 RLN2P04090 185 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 OR5I1Q13606 314 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 VWC2Q2TAL6 325 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 GFI1BQ5VTD9 330 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 MORN5Q5VZ52 161 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 SAT2Q96F10 170 aaPredicted RBP8.95□□□□□ -0.98
LINC00643-202ENST00000553426 TIMM9Q9Y5J7 89 aa8.95□□□□□ -0.98
LINC00643-202ENST00000553426 TRAV12-3A0A0B4J271 114 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 NBDYA0A0U1RRE5 68 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 J3KRW8 73 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 MPDU1O75352 247 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 FGF7P21781 194 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 RAB32Q13637 225 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 KIR3DS1Q14943 382 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 TMEM252Q8N6L7 170 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 GNPNAT1Q96EK6 184 aaPredicted RBP8.94□□□□□ -0.98
LINC00643-202ENST00000553426 PYGO2Q9BRQ0 406 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 PARD6GQ9BYG4 376 aaPredicted RBP8.94□□□□□ -0.98
LINC00643-202ENST00000553426 C11orf1Q9H5F2 150 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 GPN1Q9HCN4 374 aaPredicted RBP8.94□□□□□ -0.98
LINC00643-202ENST00000553426 HSPG2P98160 4391 aa8.94□□□□□ -0.98
LINC00643-202ENST00000553426 NPIPB6E9PJ23 425 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 SLC25A5P05141 298 aaKnown RBP8.93□□□□□ -0.98
LINC00643-202ENST00000553426 CT45A10P0DMU9 189 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 M6PRP20645 277 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 PDE6HQ13956 83 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 LINC00299Q6ZSB3 139 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 ZNRF2Q8NHG8 242 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 CHAC2Q8WUX2 184 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 RNF141Q8WVD5 230 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 S100ZQ8WXG8 99 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 MRPL53Q96EL3 112 aaKnown RBP8.93□□□□□ -0.98
LINC00643-202ENST00000553426 AAMDCQ9H7C9 122 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 ZNF586Q9NXT0 402 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 TMEM14CQ9P0S9 112 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 PRELID1Q9Y255 219 aa8.93□□□□□ -0.98
LINC00643-202ENST00000553426 NACAE9PAV3 2078 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 TRBV19A0A075B6N1 114 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 TRAV26-1A0A087WT03 109 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 IGSF23A1L1A6 192 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 GAGE7O76087 117 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 GAGE12FP0CL80 117 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 GAGE12GP0CL81 117 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 GAGE12IP0CL82 117 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 HIST1H1EP10412 219 aaKnown RBP8.92□□□□□ -0.98
LINC00643-202ENST00000553426 SSX7Q7RTT5 188 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 C6orf223Q8N319 242 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 ENKURQ8TC29 256 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 ZNF503Q96F45 646 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 LINC00477Q96M19 166 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 SLC25A31Q9H0C2 315 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 LINC00588Q9Y4M8 146 aa8.92□□□□□ -0.98
LINC00643-202ENST00000553426 IL15RAQ13261 267 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 LINC00612Q8N6U2 182 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 RXFP4Q8TDU9 374 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 BLNKQ8WV28 456 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 NPCDR1Q9BY65 106 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 KRTAP4-5Q9BYR2 181 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 KCNIP2Q9NS61 270 aa8.91□□□□□ -0.98
LINC00643-202ENST00000553426 TRGV2A0A075B6R0 118 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 C7orf71A4D174 169 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 E5RGE8 158 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 M0R3E3 92 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 GPX1P07203 203 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms