RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
MTHFD1-203ENST00000553391 CLEC5AQ9NY25 188 aa7.18□□□□□ -1.26
MTHFD1-203ENST00000553391 PEF1Q9UBV8 284 aaKnown RBP7.18□□□□□ -1.26
MTHFD1-203ENST00000553391 VPREB3Q9UKI3 123 aa7.18□□□□□ -1.26
MTHFD1-203ENST00000553391 CSPG4Q6UVK1 2322 aa7.18□□□□□ -1.26
MTHFD1-203ENST00000553391 PTPN13Q12923 2485 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 IGHV3OR16-13A0A075B7E8 117 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 IGHV3-74A0A0B4J1X5 117 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 A0A1B0GXF2 115 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 RBAKDNA6NC62 111 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 SMAD7O15105 426 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 NUPR1O60356 82 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 LCNL1Q6ZST4 164 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 TCF24Q7RTU0 167 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 ATP5L2Q7Z4Y8 100 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 GPHB5Q86YW7 130 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 Q8N2B8 174 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 GBGT1Q8N5D6 347 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 WFDC11Q8NEX6 87 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 PRR25Q96S07 402 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 C12orf57Q99622 126 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 VGLL1Q99990 258 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 NPFFR1Q9GZQ6 430 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 ZNF702PQ9H963 129 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 TP53TG3Q9ULZ0 132 aa7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 PRRC2AP48634 2157 aaKnown RBP7.17□□□□□ -1.26
MTHFD1-203ENST00000553391 LRRK2Q5S007 2527 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 IGKV2-40A0A087WW87 121 aaPredicted RBP7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 IGHV3-49A0A0A0MS15 119 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 A0A1W2PS18 150 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 HIGD1CA8MV81 97 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 A8MWP6 167 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 HOXA3O43365 443 aaPredicted RBP7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 IGKV2D-40P01614 121 aaPredicted RBP7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 HLA-DQA1P01909 254 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 ELANEP08246 267 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 SMIM6P0DI80 62 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 ESDP10768 282 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 S100A2P29034 98 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 SLC35B1P78383 322 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 SRSF2Q01130 221 aaKnown RBP7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 TMEM95Q3KNT9 176 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 ZNF575Q86XF7 245 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 TMEM86BQ8N661 226 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 TEX29Q8N6K0 151 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 RNF152Q8N8N0 203 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 OR2D3Q8NGH3 330 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 OR10D4PQ8NGN7 298 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 MYOZ3Q8TDC0 251 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 ASCL2Q99929 193 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 FOXC2Q99958 501 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 AGPAT4-IT1Q9H0P7 198 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 PPP1R14DQ9NXH3 145 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 SMPXQ9UHP9 88 aa7.16□□□□□ -1.26
MTHFD1-203ENST00000553391 USP9YO00507 2555 aaPredicted RBP7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 CR1P17927 2039 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 IGHV7-4-1A0A0J9YVY3 117 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 APCSP02743 223 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 AMBPP02760 352 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 CRISP2P16562 243 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 FOXE3Q13461 319 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 C10orf99Q6UWK7 81 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 RBPMS2Q6ZRY4 209 aaKnown RBP7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 TMEM256Q8N2U0 113 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 SIGLECL1Q8N7X8 197 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 PGLYRP4Q96LB8 373 aa7.15□□□□□ -1.26
MTHFD1-203ENST00000553391 SOCS3O14543 225 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 SH2D1AO60880 128 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 TACC2O95359 2948 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 FABP4P15090 132 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 BMI1P35226 326 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 ZNF80P51504 273 aaPredicted RBP7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 ERCC8Q13216 396 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 KIAA1644Q3SXP7 199 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 TM4SF20Q53R12 229 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 PDZD11Q5EBL8 140 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 PYY3Q5JQD4 70 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 DNLZQ5SXM8 178 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 C9orf47Q6ZRZ4 202 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 GATD1Q8NB37 220 aa7.14□□□□□ -1.27
MTHFD1-203ENST00000553391 TMEM189A5PLL7 270 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 FABP5P3A8MUU1 101 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 RPLP1P05386 114 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 GZMBP10144 247 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 LINC00310P59036 64 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 RPS20P60866 119 aaKnown RBP7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 RAB4BP61018 213 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 KRTAP1-1Q07627 177 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 OR10J3Q5JRS4 329 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 FAM162BQ5T6X4 162 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 RNF182Q8N6D2 247 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 TMEM18Q96B42 140 aa7.13□□□□□ -1.27
MTHFD1-203ENST00000553391 C16orf92Q96LL3 132 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms