RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TRGV2A0A075B6R0 118 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 A0A087WSZ3 146 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 TRAV10A0A0B4J240 114 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 ERC2-IT1O76042 136 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 MPC1LP0DKB6 136 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 ZNF93P35789 620 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-208ENST00000553278 DEFB103AP81534 67 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 C10orf55Q5SWW7 151 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 ARPINQ7Z6K5 226 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 CCL4L1Q8NHW4 92 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 ZCCHC13Q8WW36 166 aaKnown RBP2.61□□□□□ -1.99
SCFD1-208ENST00000553278 BAZ2BQ9UIF8 2168 aaKnown RBP2.61□□□□□ -1.99
SCFD1-208ENST00000553278 PCDH15Q96QU1 1955 aa2.61□□□□□ -1.99
SCFD1-208ENST00000553278 SAA1P0DJI8 122 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-208ENST00000553278 HIST1H1AQ02539 215 aaPredicted RBP2.6□□□□□ -1.99
SCFD1-208ENST00000553278 HSD17B12Q53GQ0 312 aa2.6□□□□□ -1.99
SCFD1-208ENST00000553278 OR8J3Q8NGG0 315 aa2.6□□□□□ -1.99
SCFD1-208ENST00000553278 GGACTQ9BVM4 153 aa2.6□□□□□ -1.99
SCFD1-208ENST00000553278 POLEQ07864 2286 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 FAM135BQ49AJ0 1406 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 DOCK10Q96BY6 2186 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 GBF1Q92538 1859 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 UQCRQO14949 82 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 HYPMO75409 117 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 EVI2AP22794 236 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 HAGHLQ6PII5 290 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-208ENST00000553278 TMEM14EPQ6UXP3 125 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 OR4C6Q8NH72 309 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 ZNF431Q8TF32 576 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-208ENST00000553278 CHCHD2Q9Y6H1 151 aaPredicted RBP2.59□□□□□ -1.99
SCFD1-208ENST00000553278 MYLKQ15746 1914 aa2.59□□□□□ -1.99
SCFD1-208ENST00000553278 COL4A5P29400 1685 aa2.59□□□□□ -2
SCFD1-208ENST00000553278 LOC107986453A0A1B0GWG9 222 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 M0R2Z0 102 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 TRACP01848 142 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 HBDP02042 147 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 OR5AK2Q8NH90 309 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 SMIM3Q9BZL3 60 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 COL5A1P20908 1838 aaPredicted RBP2.58□□□□□ -2
SCFD1-208ENST00000553278 SOGA1O94964 1423 aa2.58□□□□□ -2
SCFD1-208ENST00000553278 PCNX2A6NKB5 2137 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 TRBV6-8A0A0A6YYG3 113 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 CCDC160A6NGH7 325 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 SMIM24O75264 130 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 TCRAP04437 139 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 CD2P06729 351 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 CXCL8P10145 99 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 PP632Q6XCG6 107 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 CLEC2BQ92478 149 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 REG4Q9BYZ8 158 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 BANF2Q9H503 90 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 TPT1P8Q9HAU6 139 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 U3KQ87 197 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 ZFC3H1O60293 1989 aaKnown RBP2.57□□□□□ -2
SCFD1-208ENST00000553278 RGS12O14924 1447 aa2.57□□□□□ -2
SCFD1-208ENST00000553278 SLC25A5P05141 298 aaKnown RBP2.56□□□□□ -2
SCFD1-208ENST00000553278 RNASE3P12724 160 aaKnown RBP2.56□□□□□ -2
SCFD1-208ENST00000553278 QRFPP83859 136 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 TEX261Q6UWH6 196 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 GLIPR1L1Q6UWM5 242 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 ZNF833PQ6ZTB9 187 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 OR5AS1Q8N127 324 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 FKBP11Q9NYL4 201 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 OVOS2A0A0J9YW53 1432 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 OVOS2Q6IE36 1432 aa2.56□□□□□ -2
SCFD1-208ENST00000553278 C5orf67F2Z3F1 127 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 J3QR89 54 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 ALPK2Q86TB3 2170 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 MMGT1Q8N4V1 131 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 TSTD1Q8NFU3 115 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 ZNF625Q96I27 306 aaPredicted RBP2.55□□□□□ -2
SCFD1-208ENST00000553278 TANC2Q9HCD6 1990 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 KLK9Q9UKQ9 250 aa2.55□□□□□ -2
SCFD1-208ENST00000553278 SCN3AQ9NY46 2000 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 COL5A3P25940 1745 aaPredicted RBP2.54□□□□□ -2
SCFD1-208ENST00000553278 EFCAB10A6NFE3 127 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 ZNF736B4DX44 427 aaPredicted RBP2.54□□□□□ -2
SCFD1-208ENST00000553278 NDUFA2O43678 99 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 HIST1H1BP16401 226 aaKnown RBP2.54□□□□□ -2
SCFD1-208ENST00000553278 CNBPP62633 177 aaKnown RBP2.54□□□□□ -2
SCFD1-208ENST00000553278 BLCAPP62952 87 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 DIAPH2-AS1Q14236 149 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 LCE3AQ5TA76 89 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 GKN2Q86XP6 184 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 Q8N2B8 174 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 CST11Q9H112 138 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 MED9Q9NWA0 146 aa2.54□□□□□ -2
SCFD1-208ENST00000553278 FANCMQ8IYD8 2048 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 CCDC171Q6TFL3 1326 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 C9orf170A2RU37 121 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 MRPS14O60783 128 aaKnown RBP2.53□□□□□ -2
SCFD1-208ENST00000553278 SLC25A4P12235 298 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 PCOTHQ58A44 107 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 FAM74A1Q5RGS3 127 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 Q8TAT8 98 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 PSMF1Q92530 271 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 NABP2Q9BQ15 211 aa2.53□□□□□ -2
SCFD1-208ENST00000553278 NAA38Q9BRA0 125 aaKnown RBP2.53□□□□□ -2
SCFD1-208ENST00000553278 VPS25Q9BRG1 176 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms