RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CDK4-215ENST00000553237 BPIFA4PQ86YQ2 179 aa11.31□□□□□ -0.6
CDK4-215ENST00000553237 RPUSD4Q96CM3 377 aaKnown RBP11.31□□□□□ -0.6
CDK4-215ENST00000553237 PFDN5Q99471 154 aa11.31□□□□□ -0.6
CDK4-215ENST00000553237 ATP5SQ99766 215 aa11.31□□□□□ -0.6
CDK4-215ENST00000553237 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
CDK4-215ENST00000553237 OXA1LQ15070 435 aa11.3□□□□□ -0.6
CDK4-215ENST00000553237 LCN15Q6UWW0 184 aa11.3□□□□□ -0.6
CDK4-215ENST00000553237 SMIM3Q9BZL3 60 aa11.3□□□□□ -0.6
CDK4-215ENST00000553237 WDR61Q9GZS3 305 aaKnown RBP11.3□□□□□ -0.6
CDK4-215ENST00000553237 ZNF331Q9NQX6 463 aaPredicted RBP11.3□□□□□ -0.6
CDK4-215ENST00000553237 DNAH10Q8IVF4 4471 aa11.3□□□□□ -0.6
CDK4-215ENST00000553237 SLC17A3O00476 420 aa11.29□□□□□ -0.6
CDK4-215ENST00000553237 AZU1P20160 251 aa11.29□□□□□ -0.6
CDK4-215ENST00000553237 DAD1P61803 113 aa11.29□□□□□ -0.6
CDK4-215ENST00000553237 GCSAMLQ5JQS6 135 aa11.29□□□□□ -0.6
CDK4-215ENST00000553237 LINC01587Q99440 93 aa11.29□□□□□ -0.6
CDK4-215ENST00000553237 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 H3BQ15 152 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 P0DMU3 169 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 HTN1P15515 57 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 CXCL2P19875 107 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 POM121L12Q8N7R1 296 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
CDK4-215ENST00000553237 IFNA5P01569 189 aa11.27□□□□□ -0.61
CDK4-215ENST00000553237 GIPP09681 153 aaPredicted RBP11.27□□□□□ -0.61
CDK4-215ENST00000553237 IGLC2P0DOY2 106 aa11.27□□□□□ -0.61
CDK4-215ENST00000553237 Q5BKY6 102 aa11.27□□□□□ -0.61
CDK4-215ENST00000553237 WFDC1Q9HC57 220 aa11.27□□□□□ -0.61
CDK4-215ENST00000553237 KCNIP2Q9NS61 270 aa11.27□□□□□ -0.61
CDK4-215ENST00000553237 C17orf112F2Z3M2 114 aa11.26□□□□□ -0.61
CDK4-215ENST00000553237 DEFB130BP0DP73 79 aa11.26□□□□□ -0.61
CDK4-215ENST00000553237 DEFB130AP0DP74 79 aa11.26□□□□□ -0.61
CDK4-215ENST00000553237 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
CDK4-215ENST00000553237 SAT2Q96F10 170 aaPredicted RBP11.26□□□□□ -0.61
CDK4-215ENST00000553237 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
CDK4-215ENST00000553237 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
CDK4-215ENST00000553237 DNAH6Q9C0G6 4158 aa11.26□□□□□ -0.61
CDK4-215ENST00000553237 M0R2N4 97 aa11.25□□□□□ -0.61
CDK4-215ENST00000553237 CDKN1BP46527 198 aa11.25□□□□□ -0.61
CDK4-215ENST00000553237 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
CDK4-215ENST00000553237 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
CDK4-215ENST00000553237 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
CDK4-215ENST00000553237 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
CDK4-215ENST00000553237 PLAC8L1A1L4L8 177 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 LYRM9A8MSI8 78 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 TSPOP30536 169 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 TAS2R60P59551 318 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 GUK1Q16774 197 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 UBE2DNLQ8IWF7 75 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 ZNF586Q9NXT0 402 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 TMEM14CQ9P0S9 112 aa11.24□□□□□ -0.61
CDK4-215ENST00000553237 J3KRW8 73 aa11.23□□□□□ -0.61
CDK4-215ENST00000553237 PYYP10082 97 aa11.23□□□□□ -0.61
CDK4-215ENST00000553237 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
CDK4-215ENST00000553237 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
CDK4-215ENST00000553237 AQP10Q96PS8 301 aa11.23□□□□□ -0.61
CDK4-215ENST00000553237 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
CDK4-215ENST00000553237 TRBV19A0A075B6N1 114 aa11.22□□□□□ -0.61
CDK4-215ENST00000553237 HIST1H1EP10412 219 aaKnown RBP11.22□□□□□ -0.61
CDK4-215ENST00000553237 OR2T35Q8NGX2 323 aa11.22□□□□□ -0.61
CDK4-215ENST00000553237 FAM167A-AS1Q96KT0 104 aa11.22□□□□□ -0.61
CDK4-215ENST00000553237 FUT9Q9Y231 359 aa11.22□□□□□ -0.61
CDK4-215ENST00000553237 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.61
CDK4-215ENST00000553237 F5H768 121 aa11.21□□□□□ -0.61
CDK4-215ENST00000553237 CT45A10P0DMU9 189 aa11.21□□□□□ -0.61
CDK4-215ENST00000553237 GFI1BQ5VTD9 330 aa11.21□□□□□ -0.61
CDK4-215ENST00000553237 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
CDK4-215ENST00000553237 MRPL32Q9BYC8 188 aaKnown RBP11.21□□□□□ -0.61
CDK4-215ENST00000553237 FXYD6-FXYD2A0A087WZ82 144 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 H7BYZ3 331 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 M0R3E3 92 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 ZNF253O75346 499 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 NDUFB4O95168 129 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 INO80EQ8NBZ0 244 aaPredicted RBP11.2□□□□□ -0.62
CDK4-215ENST00000553237 BLNKQ8WV28 456 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 OR51M1Q9H341 326 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 NOP10Q9NPE3 64 aaKnown RBP11.2□□□□□ -0.62
CDK4-215ENST00000553237 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
CDK4-215ENST00000553237 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
CDK4-215ENST00000553237 NPIPB6E9PJ23 425 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 ERCC8Q13216 396 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 PDE6HQ13956 83 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 ZNF266Q14584 549 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 EXOC3-AS1Q8N2X6 119 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
CDK4-215ENST00000553237 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
CDK4-215ENST00000553237 TRAV12-3A0A0B4J271 114 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 CBY3A6NI87 242 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 OR10J4P0C629 311 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 NBEAP1P0C6P0 100 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 LEPP41159 167 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 CCDC28AQ8IWP9 274 aa11.18□□□□□ -0.62
CDK4-215ENST00000553237 HSD17B11Q8NBQ5 300 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms