RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 Q5BKY6 102 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 RPL7L1Q6DKI1 246 aaKnown RBP7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 OR11H2Q8NH07 326 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 FAM167A-AS1Q96KT0 104 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 TCEAL7Q9BRU2 100 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 ZNF471Q9BX82 626 aaPredicted RBP7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 SLC25A2Q9BXI2 301 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
TRAFD1-208ENST00000552890 CTXND1A0A1B0GTU2 59 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 H3BQ15 152 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 INSP01308 110 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 CNN1P51911 297 aaKnown RBP7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 RAB2AP61019 212 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 HIST1H1AQ02539 215 aaPredicted RBP7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 GCSAMLQ5JQS6 135 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 TMEM78Q5T7P6 136 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 MIR17HGQ75NE6 70 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 BAP18Q8IXM2 172 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 BLNKQ8WV28 456 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 RAB24Q969Q5 203 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 IGF2BP2-AS1Q96M15 143 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 TMEM208Q9BTX3 173 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 C11orf68Q9H3H3 251 aaKnown RBP7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 OTORQ9NRC9 128 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 ZNF586Q9NXT0 402 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 LENEPQ9Y5L5 61 aa7.53□□□□□ -1.2
TRAFD1-208ENST00000552890 TRAV8-2A0A0B4J237 113 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 TRAV5A0A0B4J249 113 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF705EA8MWA4 302 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 BOLA2-SMG1P6H3BVE0 249 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 STAG3L2P0CL84 134 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 STAG3L3P0CL85 134 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 CDKN1BP46527 198 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 ZFP69Q49AA0 526 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 FAM122CQ6P4D5 195 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 SLC51BQ86UW2 128 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 TMED6Q8WW62 240 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 FXYD5Q96DB9 178 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 ST6GAL2Q96JF0 529 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 ARL2-SNX15V9GYD0 113 aa7.52□□□□□ -1.21
TRAFD1-208ENST00000552890 TENM3Q9P273 2699 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 PRKDCP78527 4128 aaKnown RBP7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 A0A1W2PRE2 83 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 F6UZH7 168 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 G3V3Q6 166 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 HBE1P02100 147 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 PYYP10082 97 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 RANP62826 216 aaKnown RBP7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 ICAM4Q14773 271 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF124Q15973 351 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 MORN5Q5VZ52 161 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 TMUB2Q71RG4 321 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 RNF182Q8N6D2 247 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 MUC7Q8TAX7 377 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 XCL2Q9UBD3 114 aa7.51□□□□□ -1.21
TRAFD1-208ENST00000552890 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 H7BYZ3 331 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 OR10J4P0C629 311 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 ARL14EPLP0DKL9 152 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 C5orf17Q8NAS9 161 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 C20orf173Q96LM9 149 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 C17orf77Q96MU5 243 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 NIPSNAP3BQ9BS92 247 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 Q9H3A6 140 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 COL7A1Q02388 2944 aa7.5□□□□□ -1.21
TRAFD1-208ENST00000552890 C11orf94C9JXX5 98 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 SLC17A3O00476 420 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 NDUFB4O95168 129 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 IGKV3-20P01619 116 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 GCHFRP30047 84 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 TAS2R60P59551 318 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 RRN3P1Q2M238 152 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF705AQ6ZN79 300 aaPredicted RBP7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 CCDC28AQ8IWP9 274 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 CSNK1G2-AS1Q8NCQ2 148 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 OR11H4Q8NGC9 324 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 SUN5Q8TC36 379 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 PHYHIPLQ96FC7 376 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 TXNDC17Q9BRA2 123 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 EDA2RQ9HAV5 297 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 CYTL1Q9NRR1 136 aa7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 KLK5Q9Y337 293 aaPredicted RBP7.49□□□□□ -1.21
TRAFD1-208ENST00000552890 PGPA6NDG6 321 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 NUPR2A6NF83 97 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF705FA8MVS1 300 aaPredicted RBP7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 F6UB75 175 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 SMLR1H3BR10 107 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 HMGB3O15347 200 aaKnown RBP7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF705DP0CH99 300 aaPredicted RBP7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF705BP0CI00 300 aaPredicted RBP7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 TAGLN2P37802 199 aaKnown RBP7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 FHITP49789 147 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 ZNF138P52744 262 aa7.48□□□□□ -1.21
TRAFD1-208ENST00000552890 GDF5OSQ5U4N7 250 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms