RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	LINC00854	A0A1B0GVQ3	168 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465		H3BTX0	84 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	SLC17A3	O00476	420 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	PAX4	O43316	350 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	HOXB5	P09067	269 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	HAMP	P81172	84 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	ID3	Q02535	119 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	C4orf46	Q504U0	113 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	PXDC1	Q5TGL8	231 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	LINC00305	Q7Z4B0	112 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	NPVF	Q9HCQ7	196 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	PSENEN	Q9NZ42	101 aa		11.46	□□□□□ -0.57
CACNB3-222	ENST00000552465	SFT2D2	O95562	160 aa		11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	RRAS2	P62070	204 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	POLR2G	P62487	172 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	SPCS2	Q15005	226 aa		11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	TEPP	Q6URK8	271 aa		11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	BPIFA4P	Q86YQ2	179 aa		11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	ZNF680	Q8NEM1	530 aa		11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	PXMP4	Q9Y6I8	212 aa		11.45	□□□□□ -0.58
CACNB3-222	ENST00000552465	NPIPB6	E9PJ23	425 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	SPINK4	O60575	86 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	CCNK	O75909	580 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	SLC38A11	Q08AI6	406 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	PPP1R1A	Q13522	171 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	SAT2	Q96F10	170 aa	Predicted RBP	11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	LINC00467	Q9BRT7	94 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	MSRB1	Q9NZV6	116 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	LY96	Q9Y6Y9	160 aa		11.44	□□□□□ -0.58
CACNB3-222	ENST00000552465	SRRM2	Q9UQ35	2752 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	FNDC10	F2Z333	226 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465		H3BQ15	152 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	SLC25A5	P05141	298 aa	Known RBP	11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	IGLC2	P0DOY2	106 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	ST6GAL2	Q96JF0	529 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	SMIM8	Q96KF7	97 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	SOST	Q9BQB4	213 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	PRO0255	Q9UI72	69 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465	KLF12	Q9Y4X4	402 aa		11.43	□□□□□ -0.58
CACNB3-222	ENST00000552465		K7EP13	123 aa		11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	GOSR2	O14653	212 aa		11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	FAU	P35544	74 aa	Known RBP	11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	MRPL23	Q16540	153 aa	Known RBP	11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	ANXA2R	Q3ZCQ2	193 aa		11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	MORN5	Q5VZ52	161 aa		11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	EIF4E3	Q8N5X7	224 aa	Known RBP	11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	TMEM37	Q8WXS4	190 aa		11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	TMEM70	Q9BUB7	260 aa		11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	CCDC59	Q9P031	241 aa	Known RBP	11.42	□□□□□ -0.58
CACNB3-222	ENST00000552465	C7orf71	A4D174	169 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	PRAF2	O60831	178 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	IGHV3-53	P01767	116 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	METTL15P1	P0C7V9	234 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	SMIM18	P0DKX4	95 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	CRYBA4	P53673	196 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	SLA	Q13239	276 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	OPCML	Q14982	345 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	TMEM14EP	Q6UXP3	125 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	NEGR1	Q7Z3B1	354 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	ZNF546	Q86UE3	836 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	OR10P1	Q8NGE3	313 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	MGAT4C	Q9UBM8	478 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	HHLA3	Q9XRX5	114 aa		11.41	□□□□□ -0.58
CACNB3-222	ENST00000552465	FABP12	A6NFH5	140 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	AGPAT2	O15120	278 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	SSSCA1	O60232	199 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	COX7A2P2	O60397	106 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	TCL1A	P56279	114 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	CD300C	Q08708	224 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	FHL2	Q14192	279 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	C8orf49	Q96NF6	230 aa		11.4	□□□□□ -0.58
CACNB3-222	ENST00000552465	IGLV5-52	A0A0A0MRZ9	124 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	KLLN	B2CW77	178 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	EVI2A	P22794	236 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	TNFSF8	P32971	234 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	ERCC8	Q13216	396 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	C10orf113	Q5VZT2	155 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	WFDC10B	Q8IUB3	73 aa		11.39	□□□□□ -0.59
CACNB3-222	ENST00000552465	RNASE4	P34096	147 aa	Known RBP	11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	AP3S2	P59780	193 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	BTN1A1	Q13410	526 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	GUK1	Q16774	197 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	TOMM5	Q8N4H5	51 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	MCFD2	Q8NI22	146 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	DYNC2LI1	Q8TCX1	351 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	FAM19A4	Q96LR4	140 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	VGLL1	Q99990	258 aa		11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	MRPL16	Q9NX20	251 aa	Known RBP	11.38	□□□□□ -0.59
CACNB3-222	ENST00000552465	TRAV5	A0A0B4J249	113 aa		11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	MPDU1	O75352	247 aa		11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	ARL16	Q0P5N6	197 aa		11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	IBA57	Q5T440	356 aa	Known RBP	11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	NTN5	Q8WTR8	489 aa	Predicted RBP	11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	TRIM63	Q969Q1	353 aa		11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	LINC00477	Q96M19	166 aa		11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	MGST2	Q99735	147 aa		11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	MRPL32	Q9BYC8	188 aa	Known RBP	11.37	□□□□□ -0.59
CACNB3-222	ENST00000552465	DNAJC4	Q9NNZ3	241 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms