RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	UBE2C	O00762	179 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	IFNA5	P01569	189 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	HLA-DRB4	P13762	266 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	RPL35A	P18077	110 aa	Known RBP	4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	ZNF266	Q14584	549 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	DEFB135	Q30KP9	77 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	GCSAML	Q5JQS6	135 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	ACTL10	Q5JWF8	245 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	LCN15	Q6UWW0	184 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	BPIFA4P	Q86YQ2	179 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	STH	Q8IWL8	128 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	ZNF709	Q8N972	641 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	HRH4	Q9H3N8	390 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	WFDC1	Q9HC57	220 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	RETN	Q9HD89	108 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	TNFSF18	Q9UNG2	199 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	TP53TG1	Q9Y2A0	90 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	HLA-DRB4	X5D2U9	266 aa		4.86	□□□□□ -1.63
CNOT2-238	ENST00000552422	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	FXYD6-FXYD2	A0A087WZ82	144 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	TRAV8-2	A0A0B4J237	113 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422		H3BMM0	161 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	CA1	P00915	261 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	GIG44	P09565	113 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	IGLC2	P0DOY2	106 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	SPP1	P10451	314 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	CXCL2	P19875	107 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	DEFB1	P60022	68 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	GDF5OS	Q5U4N7	250 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	MORN3	Q6PF18	240 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	FOXI2	Q6ZQN5	318 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	RNF182	Q8N6D2	247 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	SCGB1C1	Q8TD33	95 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	LINC00052	Q96N35	136 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	OVOL2	Q9BRP0	275 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	CSTL1	Q9H114	145 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	SAV1	Q9H4B6	383 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	RPRM	Q9NS64	109 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	TMEM14C	Q9P0S9	112 aa		4.85	□□□□□ -1.63
CNOT2-238	ENST00000552422	TRAV5	A0A0B4J249	113 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422		A0A0J9YX75	114 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422		H3BQ15	152 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC17A3	O00476	420 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	ARPC5	O15511	151 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	SPRY2	O43597	315 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	C4BPB	P20851	252 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	PDE6H	Q13956	83 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	ZNF345	Q14585	488 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	GUK1	Q16774	197 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	TMEM41B	Q5BJD5	291 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	FFAR4	Q5NUL3	377 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	FAM78B	Q5VT40	261 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	SPATA31B1P	Q5VZV4	182 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	OR2G3	Q8NGZ4	309 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	RNF183	Q96D59	192 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	SAT2	Q96F10	170 aa	Predicted RBP	4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	FAM167A-AS1	Q96KT0	104 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC50A1	Q9BRV3	221 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	SLC25A2	Q9BXI2	301 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	MRPL32	Q9BYC8	188 aa	Known RBP	4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	EDA2R	Q9HAV5	297 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	TIMM9	Q9Y5J7	89 aa		4.84	□□□□□ -1.63
CNOT2-238	ENST00000552422	TRBV19	A0A075B6N1	114 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422		A8MTW9	85 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422		F6UB75	175 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	SMLR1	H3BR10	107 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	ZNF253	O75346	499 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	SNRPC	P09234	159 aa	Known RBP	4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	HIST1H1E	P10412	219 aa	Known RBP	4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	NUTF2	P61970	127 aa	Known RBP	4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	RHOB	P62745	196 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	EBLN2	Q6P2I7	272 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	MIR17HG	Q75NE6	70 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	HSD17B11	Q8NBQ5	300 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	CSNK1G2-AS1	Q8NCQ2	148 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	PSMG3	Q9BT73	122 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	ZNF586	Q9NXT0	402 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	FUT9	Q9Y231	359 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	RFNG	Q9Y644	331 aa		4.83	□□□□□ -1.64
CNOT2-238	ENST00000552422	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	LOC102723971	A0A1B0GUV8	181 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	HMSD	A8MTL9	139 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422		H3BTX0	84 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	TAAR5	O14804	337 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	OR7C2	O60412	319 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	NDUFB4	O95168	129 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	PYY	P10082	97 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	M6PR	P20645	277 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	ATP6V0C	P27449	155 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	HLA-DMB	P28068	263 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	CNN1	P51911	297 aa	Known RBP	4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	RAB2A	P61019	212 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	SERF2	P84101	59 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	PSG3	Q16557	428 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	KHDC3L	Q587J8	217 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	RPL7L1	Q6DKI1	246 aa	Known RBP	4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	AMTN	Q6UX39	209 aa		4.82	□□□□□ -1.64
CNOT2-238	ENST00000552422	ZNF738	Q8NE65	137 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms