RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 AMTNQ6UX39 209 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
DDX54-210ENST00000552375 Q6ZTC4 211 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 OR8A1Q8NGG7 326 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 CLUHP3Q96NS8 147 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 MRPL32Q9BYC8 188 aaKnown RBP10.09□□□□□ -0.79
DDX54-210ENST00000552375 FUT9Q9Y231 359 aa10.09□□□□□ -0.79
DDX54-210ENST00000552375 RNF222A6NCQ9 220 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 G3V3Q6 166 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 BOLA2-SMG1P6H3BVE0 249 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 OR7C2O60412 319 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 FAM122CQ6P4D5 195 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 EXOC3-AS1Q8N2X6 119 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 SAT2Q96F10 170 aaPredicted RBP10.08□□□□□ -0.8
DDX54-210ENST00000552375 FAM167A-AS1Q96KT0 104 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 PPP1R14DQ9NXH3 145 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 TMEM14CQ9P0S9 112 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 CELA1Q9UNI1 258 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 TIMM9Q9Y5J7 89 aa10.08□□□□□ -0.8
DDX54-210ENST00000552375 TRBV19A0A075B6N1 114 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 TRAV10A0A0B4J240 114 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 A8MTW9 85 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 J3KRW8 73 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 M0R3E3 92 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 NDUFB4O95168 129 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 HIST1H1EP10412 219 aaKnown RBP10.07□□□□□ -0.8
DDX54-210ENST00000552375 EMP1P54849 157 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 ZNF767PQ75MW2 155 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 RPP25LQ8N5L8 163 aaKnown RBP10.07□□□□□ -0.8
DDX54-210ENST00000552375 INO80EQ8NBZ0 244 aaPredicted RBP10.07□□□□□ -0.8
DDX54-210ENST00000552375 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 PHYHIPLQ96FC7 376 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 NEU1Q99519 415 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 PAXXQ9BUH6 204 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 SH3BGRL3Q9H299 93 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 TNFSF18Q9UNG2 199 aa10.07□□□□□ -0.8
DDX54-210ENST00000552375 HMGB3O15347 200 aaKnown RBP10.06□□□□□ -0.8
DDX54-210ENST00000552375 ARPC5O15511 151 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 INSP01308 110 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 UBE2L3P68036 154 aaKnown RBP10.06□□□□□ -0.8
DDX54-210ENST00000552375 GUK1Q16774 197 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 C1orf158Q8N1D5 194 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 FXYD5Q96DB9 178 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 TMEM208Q9BTX3 173 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 GOLT1BQ9Y3E0 138 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
DDX54-210ENST00000552375 IGLL5B9A064 214 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 PRM2P04554 102 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 ATP6V0CP27449 155 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 ZNF266Q14584 549 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 ICAM4Q14773 271 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 ACOT6Q3I5F7 207 aaPredicted RBP10.05□□□□□ -0.8
DDX54-210ENST00000552375 KHDC3LQ587J8 217 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 RPL7L1Q6DKI1 246 aaKnown RBP10.05□□□□□ -0.8
DDX54-210ENST00000552375 OR10J6PQ8NGY7 276 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 ZNF503Q96F45 646 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 IGF2BP2-AS1Q96M15 143 aa10.05□□□□□ -0.8
DDX54-210ENST00000552375 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
DDX54-210ENST00000552375 TMEM189A5PLL7 270 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
DDX54-210ENST00000552375 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
DDX54-210ENST00000552375 AMBPP02760 352 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 ERCC8Q13216 396 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 KIR3DS1Q14943 382 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 APLNQ9ULZ1 77 aa10.04□□□□□ -0.8
DDX54-210ENST00000552375 IGHV4-4A0A075B6R2 117 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 LOC102723971A0A1B0GUV8 181 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 ZNF253O75346 499 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 HBE1P02100 147 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 NBEAP1P0C6P0 100 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 M6PRP20645 277 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 PDE6HQ13956 83 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 OR10G4Q8NGN3 311 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 OR10G9Q8NGN4 311 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 OR10G7Q8NGN6 311 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
DDX54-210ENST00000552375 DEFB131BA0A096LNP1 70 aa10.02□□□□□ -0.81
DDX54-210ENST00000552375 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.81
DDX54-210ENST00000552375 A0A1W2PPV4 95 aa10.02□□□□□ -0.81
DDX54-210ENST00000552375 ZNF705GA8MUZ8 300 aaPredicted RBP10.02□□□□□ -0.81
DDX54-210ENST00000552375 NPIPB6E9PJ23 425 aa10.02□□□□□ -0.81
DDX54-210ENST00000552375 CDC34P49427 236 aaPredicted RBP10.02□□□□□ -0.81
DDX54-210ENST00000552375 TAS2R45P59539 299 aa10.02□□□□□ -0.81
DDX54-210ENST00000552375 BORCS7-ASMTA0A0B4J1R7 106 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 CT45A10P0DMU9 189 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 HTN1P15515 57 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 CDKN1BP46527 198 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 RANP62826 216 aaKnown RBP10.01□□□□□ -0.81
DDX54-210ENST00000552375 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 MRPL53Q96EL3 112 aaKnown RBP10.01□□□□□ -0.81
DDX54-210ENST00000552375 PSMG3Q9BT73 122 aaPredicted RBP10.01□□□□□ -0.81
DDX54-210ENST00000552375 Q9H3A6 140 aa10.01□□□□□ -0.81
DDX54-210ENST00000552375 hCG_2014768A0A024R1R8 64 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms