RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 STAG3L2P0CL84 134 aa13.67□□□□□ -0.22
DDX54-209ENST00000551912 STAG3L3P0CL85 134 aa13.67□□□□□ -0.22
DDX54-209ENST00000551912 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
DDX54-209ENST00000551912 CNN1P51911 297 aaKnown RBP13.67□□□□□ -0.22
DDX54-209ENST00000551912 BAP18Q8IXM2 172 aa13.67□□□□□ -0.22
DDX54-209ENST00000551912 OR8A1Q8NGG7 326 aa13.67□□□□□ -0.22
DDX54-209ENST00000551912 MRPL53Q96EL3 112 aaKnown RBP13.67□□□□□ -0.22
DDX54-209ENST00000551912 PRELID1Q9Y255 219 aa13.67□□□□□ -0.22
DDX54-209ENST00000551912 TP53TG1Q9Y2A0 90 aa13.67□□□□□ -0.22
DDX54-209ENST00000551912 SPRY2O43597 315 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
DDX54-209ENST00000551912 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
DDX54-209ENST00000551912 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
DDX54-209ENST00000551912 ARL14EPLP0DKL9 152 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 C4BPBP20851 252 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 HIST1H1AQ02539 215 aaPredicted RBP13.66□□□□□ -0.22
DDX54-209ENST00000551912 EXOC3-AS1Q8N2X6 119 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 STOML3Q8TAV4 291 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 RNF183Q96D59 192 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 PHYHIPLQ96FC7 376 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 OVOL2Q9BRP0 275 aa13.66□□□□□ -0.22
DDX54-209ENST00000551912 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
DDX54-209ENST00000551912 CTXND1A0A1B0GTU2 59 aa13.65□□□□□ -0.22
DDX54-209ENST00000551912 A8MTW9 85 aa13.65□□□□□ -0.22
DDX54-209ENST00000551912 RANP62826 216 aaKnown RBP13.65□□□□□ -0.22
DDX54-209ENST00000551912 ICAM4Q14773 271 aa13.65□□□□□ -0.22
DDX54-209ENST00000551912 LYPD1Q8N2G4 141 aa13.65□□□□□ -0.22
DDX54-209ENST00000551912 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
DDX54-209ENST00000551912 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
DDX54-209ENST00000551912 M0R3E3 92 aa13.64□□□□□ -0.23
DDX54-209ENST00000551912 CXorf1O96002 111 aa13.64□□□□□ -0.23
DDX54-209ENST00000551912 PRB4P10163 310 aaPredicted RBP13.64□□□□□ -0.23
DDX54-209ENST00000551912 SSX7Q7RTT5 188 aa13.64□□□□□ -0.23
DDX54-209ENST00000551912 C9orf62Q8N4C0 152 aa13.64□□□□□ -0.23
DDX54-209ENST00000551912 OR10J6PQ8NGY7 276 aa13.64□□□□□ -0.23
DDX54-209ENST00000551912 UMAD1C9J7I0 102 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 GCHFRP30047 84 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 FXYD7P58549 80 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 ZNF726P1Q15940 193 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 SLC51BQ86UW2 128 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 TMED6Q8WW62 240 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 SLC35B3Q9H1N7 401 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 Q9H3A6 140 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
DDX54-209ENST00000551912 EIF5AL1Q6IS14 154 aaKnown RBP13.62□□□□□ -0.23
DDX54-209ENST00000551912 AMTNQ6UX39 209 aa13.62□□□□□ -0.23
DDX54-209ENST00000551912 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
DDX54-209ENST00000551912 PPP1R14DQ9NXH3 145 aa13.62□□□□□ -0.23
DDX54-209ENST00000551912 STAB2Q8WWQ8 2551 aa13.62□□□□□ -0.23
DDX54-209ENST00000551912 IQCF2Q8IXL9 164 aa13.61□□□□□ -0.23
DDX54-209ENST00000551912 OTORQ9NRC9 128 aa13.61□□□□□ -0.23
DDX54-209ENST00000551912 PLA2G2EQ9NZK7 142 aa13.61□□□□□ -0.23
DDX54-209ENST00000551912 CSN1S1P47710 185 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 FHITP49789 147 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 FAM74A1Q5RGS3 127 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 CSNK1G2-AS1Q8NCQ2 148 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 OR11H2Q8NH07 326 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 SUN5Q8TC36 379 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 RARRES2Q99969 163 aa13.6□□□□□ -0.23
DDX54-209ENST00000551912 MAP1LC3B2A6NCE7 125 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 NPIPB6E9PJ23 425 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 BOLA2-SMG1P6H3BVE0 249 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 AMBPP02760 352 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 DPPA3Q6W0C5 159 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 FAM213BQ8TBF2 198 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 MAP1LC3BQ9GZQ8 125 aa13.59□□□□□ -0.23
DDX54-209ENST00000551912 PGPA6NDG6 321 aa13.58□□□□□ -0.24
DDX54-209ENST00000551912 M0R2Z0 102 aa13.58□□□□□ -0.24
DDX54-209ENST00000551912 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
DDX54-209ENST00000551912 FGF8P55075 233 aaPredicted RBP13.58□□□□□ -0.24
DDX54-209ENST00000551912 CMTM2Q8TAZ6 248 aa13.58□□□□□ -0.24
DDX54-209ENST00000551912 RXFP4Q8TDU9 374 aa13.58□□□□□ -0.24
DDX54-209ENST00000551912 IGKV2-40A0A087WW87 121 aaPredicted RBP13.57□□□□□ -0.24
DDX54-209ENST00000551912 IGKV2D-40P01614 121 aaPredicted RBP13.57□□□□□ -0.24
DDX54-209ENST00000551912 WWC2-AS2Q96NR7 200 aa13.57□□□□□ -0.24
DDX54-209ENST00000551912 RAB5CP51148 216 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 ERCC8Q13216 396 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 C9orf47Q6ZRZ4 202 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 IGF2BP2-AS1Q96M15 143 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 LINC00477Q96M19 166 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 ODF3Q96PU9 254 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 TMPRSS5Q9H3S3 457 aa13.56□□□□□ -0.24
DDX54-209ENST00000551912 ZNF705EA8MWA4 302 aaPredicted RBP13.55□□□□□ -0.24
DDX54-209ENST00000551912 DIRC3C9JPN6 131 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 INSP01308 110 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 CT45A10P0DMU9 189 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 TSPOP30536 169 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 CDKN1BP46527 198 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 TMEM78Q5T7P6 136 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 ARL6IP6Q8N6S5 226 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 SFT2D1Q8WV19 159 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 MBD3L1Q8WWY6 194 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 AGPAT4-IT1Q9H0P7 198 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 EDA2RQ9HAV5 297 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
DDX54-209ENST00000551912 TRAV12-2A0A075B6T6 113 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 A0A1W2PRE2 83 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 RBAKDNA6NC62 111 aa13.54□□□□□ -0.24
DDX54-209ENST00000551912 CRXO43186 299 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms