RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 UFC1Q9Y3C8 167 aa4.78□□□□□ -1.64
DEPDC4-210ENST00000551642 TIMM9Q9Y5J7 89 aa4.78□□□□□ -1.64
DEPDC4-210ENST00000551642 PXMP4Q9Y6I8 212 aa4.78□□□□□ -1.64
DEPDC4-210ENST00000551642 TMEM213A2RRL7 107 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 YIF1AO95070 293 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 C4BPBP20851 252 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 CBLN1P23435 193 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 NPPCP23582 126 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 GATA2P23769 480 aaPredicted RBP4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 S100A7P31151 101 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 INSL3P51460 131 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 EIF5AP63241 154 aaKnown RBP4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 SERF2P84101 59 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 USF2Q15853 346 aaPredicted RBP4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 RPL7L1Q6DKI1 246 aaKnown RBP4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 IL34Q6ZMJ4 242 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 Q6ZRG5 221 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 S100A7AQ86SG5 101 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 STOML3Q8TAV4 291 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 TMED6Q8WW62 240 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 GNPNAT1Q96EK6 184 aaPredicted RBP4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 RSG1Q9BU20 258 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 C20orf24Q9BUV8 137 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 RETNQ9HD89 108 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 SLC39A9Q9NUM3 307 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 MRPL27Q9P0M9 148 aaKnown RBP4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 MDFICQ9P1T7 246 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 RABAC1Q9UI14 185 aa4.77□□□□□ -1.65
DEPDC4-210ENST00000551642 A0A087WYN8 130 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 IGHV7-4-1A0A0J9YVY3 117 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 A0A1W2PS18 150 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 HYPMO75409 117 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 CSN3P07498 182 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 SPP1P10451 314 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 FOLR2P14207 255 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 ORM2P19652 201 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 ATP6V0CP27449 155 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 BMI1P35226 326 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 LYZP61626 148 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 B2MP61769 119 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 C9orf66Q5T8R8 295 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 MIC13Q5XKP0 118 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 PATE2Q6UY27 113 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 HSD17B11Q8NBQ5 300 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 OR1L4Q8NGR5 311 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 OR2G3Q8NGZ4 309 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 TMEM37Q8WXS4 190 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 METTL26Q96S19 204 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 PFDN5Q99471 154 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 ZNF471Q9BX82 626 aaPredicted RBP4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 VSIRQ9H7M9 311 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 DNAJC4Q9NNZ3 241 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 SMPXQ9UHP9 88 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 RNF24Q9Y225 148 aa4.76□□□□□ -1.65
DEPDC4-210ENST00000551642 IGHV3OR16-8A0A075B7F1 116 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 SEC14L6B5MCN3 397 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 H3BRN7 92 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 BOLA2-SMG1P6H3BVE0 249 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 CHEK1O14757 476 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 ZNF207O43670 478 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 BUB3O43684 328 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 COX7A2P2O60397 106 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 CDK2AP2O75956 126 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 IGLV1-51P01701 117 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 MBP02144 154 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 APOHP02749 345 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 CD5P06127 495 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 OR5G3P0C626 314 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 SEC11BP0C7V7 166 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 RBMY1CP0DJD4 496 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 TPT1P13693 172 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 M6PRP20645 277 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 NKX2-5P52952 324 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 FFAR4Q5NUL3 377 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 C1orf194Q5T5A4 169 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 C10orf113Q5VZT2 155 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 LGALS9CQ6DKI2 356 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 C16orf54Q6UWD8 224 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 SLC51BQ86UW2 128 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 BAP18Q8IXM2 172 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 OR1B1Q8NGR6 318 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 GRAMD2BQ96HH9 432 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 NARS2Q96I59 477 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 RNF2Q99496 336 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 FAM110AQ9BQ89 295 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 SHANK2-AS3Q9BTD1 123 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 PBDC1Q9BVG4 233 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 RHPN1-AS1Q9BWJ2 59 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 SLC25A39Q9BZJ4 359 aaPredicted RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 SH3BGRL3Q9H299 93 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 TMEM231Q9H6L2 316 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 TECRQ9NZ01 308 aaKnown RBP4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 MLXQ9UH92 298 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 HIGD1AQ9Y241 93 aa4.75□□□□□ -1.65
DEPDC4-210ENST00000551642 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
DEPDC4-210ENST00000551642 ZNF98A6NK75 572 aa4.74□□□□□ -1.65
DEPDC4-210ENST00000551642 UMAD1C9J7I0 102 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms