RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 GAGE12FP0CL80 117 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 GAGE12GP0CL81 117 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 GAGE12IP0CL82 117 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 HOXA5P20719 270 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 LEPP41159 167 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 GUK1Q16774 197 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 ESRGQ1W209 222 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 ZBTB8BQ8NAP8 495 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-221ENST00000550914 TMEM37Q8WXS4 190 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 SAT2Q96F10 170 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-221ENST00000550914 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 SRRQ9GZT4 340 aa8.89□□□□□ -0.99
PTCH1-221ENST00000550914 RCL1Q9Y2P8 373 aaKnown RBP8.89□□□□□ -0.99
PTCH1-221ENST00000550914 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-221ENST00000550914 A0A0J9YY99 117 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 C7orf66A4D0T2 115 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 SCGB1D2O95969 90 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 INPP1P49441 399 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 ARL16Q0P5N6 197 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 RAB31Q13636 194 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 OPCMLQ14982 345 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 CNPY1Q3B7I2 92 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 C10orf113Q5VZT2 155 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 MITD1Q8WV92 249 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 MGST2Q99735 147 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 PARD6GQ9BYG4 376 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-221ENST00000550914 DNAJC4Q9NNZ3 241 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 SCRT2Q9NQ03 307 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 FLVCR2Q9UPI3 526 aa8.88□□□□□ -0.99
PTCH1-221ENST00000550914 H3BQ15 152 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 ZNF253O75346 499 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 MBPP02686 304 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-221ENST00000550914 CT45A10P0DMU9 189 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 PRB4P10163 310 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-221ENST00000550914 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 TRIQKQ629K1 86 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 Q6ZRG5 221 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 ZNF680Q8NEM1 530 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 ZNF431Q8TF32 576 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-221ENST00000550914 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
PTCH1-221ENST00000550914 TMPRSS5Q9H3S3 457 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 GSKIPQ9P0R6 139 aa8.87□□□□□ -0.99
PTCH1-221ENST00000550914 TRAV12-3A0A0B4J271 114 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 CENPXA8MT69 81 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 SLC25A5P05141 298 aaKnown RBP8.86□□□□□ -0.99
PTCH1-221ENST00000550914 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
PTCH1-221ENST00000550914 CAMLGP49069 296 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 Q6ZTI0 123 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 OR1L4Q8NGR5 311 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 PFDN5Q99471 154 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 LINC00467Q9BRT7 94 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 ZNF586Q9NXT0 402 aa8.86□□□□□ -0.99
PTCH1-221ENST00000550914 A0A096LPF7 62 aa8.85□□□□□ -0.99
PTCH1-221ENST00000550914 LINC00854A0A1B0GVQ3 168 aa8.85□□□□□ -0.99
PTCH1-221ENST00000550914 H3BTX0 84 aa8.85□□□□□ -0.99
PTCH1-221ENST00000550914 BTCP35070 178 aa8.85□□□□□ -0.99
PTCH1-221ENST00000550914 BAK1Q16611 211 aa8.85□□□□□ -0.99
PTCH1-221ENST00000550914 C12orf45Q8N5I9 185 aaPredicted RBP8.85□□□□□ -0.99
PTCH1-221ENST00000550914 VSIG2Q96IQ7 327 aa8.85□□□□□ -0.99
PTCH1-221ENST00000550914 TRGV2A0A075B6R0 118 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 C7orf71A4D174 169 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 CCDC160A6NGH7 325 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 KLLNB2CW77 178 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 L7N2F9 121 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 VAMP2P63027 116 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 ANXA2RQ3ZCQ2 193 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-221ENST00000550914 NRARPQ7Z6K4 114 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 CHAC2Q8WUX2 184 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 PRELID1Q9Y255 219 aa8.84□□□□□ -0.99
PTCH1-221ENST00000550914 HERC1Q15751 4861 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 J3KRW8 73 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
PTCH1-221ENST00000550914 NMBP08949 121 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
PTCH1-221ENST00000550914 LINC00315P59091 139 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 PDE6HQ13956 83 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 ZNF846Q147U1 533 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 VWC2Q2TAL6 325 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 MIC13Q5XKP0 118 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 EIF4E3Q8N5X7 224 aaKnown RBP8.83□□□□□ -1
PTCH1-221ENST00000550914 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 LINC00477Q96M19 166 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 C20orf85Q9H1P6 137 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 UQCC1Q9NVA1 299 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 TMEM14CQ9P0S9 112 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 WDR83OSQ9Y284 106 aa8.83□□□□□ -1
PTCH1-221ENST00000550914 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
PTCH1-221ENST00000550914 TRAV5A0A0B4J249 113 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 SIVA1O15304 175 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 SPINK4O60575 86 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
PTCH1-221ENST00000550914 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
PTCH1-221ENST00000550914 SDHCQ99643 169 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms