RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SBSPONQ8IVN8 264 aa9.59□□□□□ -0.87
RAB5C-206ENST00000550406 MAP1LC3BQ9GZQ8 125 aa9.59□□□□□ -0.87
RAB5C-206ENST00000550406 HUWE1Q7Z6Z7 4374 aaKnown RBP9.58□□□□□ -0.88
RAB5C-206ENST00000550406 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
RAB5C-206ENST00000550406 A8MTW9 85 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 GIG44P09565 113 aaPredicted RBP9.58□□□□□ -0.88
RAB5C-206ENST00000550406 HLA-DRB4P13762 266 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 EIF5AL1Q6IS14 154 aaKnown RBP9.58□□□□□ -0.88
RAB5C-206ENST00000550406 ALKAL2Q6UX46 152 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 ZNF738Q8NE65 137 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 RPUSD4Q96CM3 377 aaKnown RBP9.58□□□□□ -0.88
RAB5C-206ENST00000550406 ASCL2Q99929 193 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 Q9H3A6 140 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 HLA-DRB4X5D2U9 266 aa9.58□□□□□ -0.88
RAB5C-206ENST00000550406 RAB5CP51148 216 aa9.57□□□□□ -0.88
RAB5C-206ENST00000550406 CCL20P78556 96 aa9.57□□□□□ -0.88
RAB5C-206ENST00000550406 STHQ8IWL8 128 aa9.57□□□□□ -0.88
RAB5C-206ENST00000550406 LYPD1Q8N2G4 141 aa9.57□□□□□ -0.88
RAB5C-206ENST00000550406 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
RAB5C-206ENST00000550406 MRPL53Q96EL3 112 aaKnown RBP9.57□□□□□ -0.88
RAB5C-206ENST00000550406 CLEC5AQ9NY25 188 aa9.57□□□□□ -0.88
RAB5C-206ENST00000550406 PGPA6NDG6 321 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 H2AFB1P0C5Y9 115 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 CNN1P51911 297 aaKnown RBP9.56□□□□□ -0.88
RAB5C-206ENST00000550406 AMTNQ6UX39 209 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 SFT2D1Q8WV19 159 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 TMEM167BQ9NRX6 74 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 PRELID1Q9Y255 219 aa9.56□□□□□ -0.88
RAB5C-206ENST00000550406 YTHDF2Q9Y5A9 579 aaKnown RBP9.56□□□□□ -0.88
RAB5C-206ENST00000550406 A0A1B0GV50 99 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 IGKV3-20P01619 116 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 EBLN2Q6P2I7 272 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 IQCF2Q8IXL9 164 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 OR4B1Q8NGF8 309 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 CSTL1Q9H114 145 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 AAMDCQ9H7C9 122 aa9.55□□□□□ -0.88
RAB5C-206ENST00000550406 TRAV1-1A0A0B4J248 108 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 KIR2DL5BA0A0G2JN68 375 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 KIR2DL5BA0A0G2JPC4 375 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 A0A1W2PRE2 83 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 FXYD7P58549 80 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 UBE2G2P60604 165 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 HIST1H1AQ02539 215 aaPredicted RBP9.54□□□□□ -0.88
RAB5C-206ENST00000550406 KIR2DL5AQ8N109 375 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 KIR2DL5BQ8NHK3 375 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 TM2D3Q9BRN9 247 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 SLC35B3Q9H1N7 401 aa9.54□□□□□ -0.88
RAB5C-206ENST00000550406 IGKV2-40A0A087WW87 121 aaPredicted RBP9.53□□□□□ -0.88
RAB5C-206ENST00000550406 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 DUSP14O95147 198 aaKnown RBP9.53□□□□□ -0.88
RAB5C-206ENST00000550406 IGKV2D-40P01614 121 aaPredicted RBP9.53□□□□□ -0.88
RAB5C-206ENST00000550406 SUMO1P63165 101 aaKnown RBP9.53□□□□□ -0.88
RAB5C-206ENST00000550406 GNG5P63218 68 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 ERCC8Q13216 396 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 VGLL1Q99990 258 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 RETNQ9HD89 108 aa9.53□□□□□ -0.88
RAB5C-206ENST00000550406 ZNF705EA8MWA4 302 aaPredicted RBP9.52□□□□□ -0.89
RAB5C-206ENST00000550406 CT45A10P0DMU9 189 aa9.52□□□□□ -0.89
RAB5C-206ENST00000550406 APOC4P55056 127 aa9.52□□□□□ -0.89
RAB5C-206ENST00000550406 MORN3Q6PF18 240 aaPredicted RBP9.52□□□□□ -0.89
RAB5C-206ENST00000550406 C9orf47Q6ZRZ4 202 aa9.52□□□□□ -0.89
RAB5C-206ENST00000550406 CCDC28AQ8IWP9 274 aa9.52□□□□□ -0.89
RAB5C-206ENST00000550406 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.89
RAB5C-206ENST00000550406 UBE2CO00762 179 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 CRXO43186 299 aaPredicted RBP9.51□□□□□ -0.89
RAB5C-206ENST00000550406 PAGE4O60829 102 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 CA1P00915 261 aaPredicted RBP9.51□□□□□ -0.89
RAB5C-206ENST00000550406 SLC25A5P05141 298 aaKnown RBP9.51□□□□□ -0.89
RAB5C-206ENST00000550406 KIR3DS1Q14943 382 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 ARL6IP6Q8N6S5 226 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 ZNF680Q8NEM1 530 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 OR10J6PQ8NGY7 276 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 FAM19A4Q96LR4 140 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
RAB5C-206ENST00000550406 COL7A1Q02388 2944 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 M0R2Z0 102 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 HBE1P02100 147 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 CSN1S1P47710 185 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 ATP5G3P48201 142 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 SPINK13Q1W4C9 94 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 DEFB135Q30KP9 77 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 Q6ZWC4 215 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
RAB5C-206ENST00000550406 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 TCRAP04437 139 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 BLOC1S1P78537 153 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 IFITM2Q01629 132 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms