RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 A0A087WUJ7 227 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 UQCRHLA0A096LP55 91 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 GGT3PA6NGU5 568 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 DEFB108AA8MXU0 73 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 ODF3BA8MYP8 253 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 C5orf58C9J3I9 102 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 SERPINA1P01009 418 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 IFNA14P01570 189 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 SRP19P09132 144 aaKnown RBP2.83□□□□□ -1.96
HCFC2-204ENST00000550335 ZNF728P0DKX0 622 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 ERVS71-1P61550 626 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 CDK6Q00534 326 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 AKIRIN2Q53H80 203 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 LPCAT3Q6P1A2 487 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 Q6ZS49 121 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 ARPINQ7Z6K5 226 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 OR6V1Q8N148 313 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 MRPS24Q96EL2 167 aaKnown RBP2.83□□□□□ -1.96
HCFC2-204ENST00000550335 CGREF1Q99674 301 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 COMMD5Q9GZQ3 224 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 WDR61Q9GZS3 305 aaKnown RBP2.83□□□□□ -1.96
HCFC2-204ENST00000550335 DCSTAMPQ9H295 470 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 SAR1AQ9NR31 198 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 GID8Q9NWU2 228 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 FUT9Q9Y231 359 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 SPTAN1Q13813 2472 aaKnown RBP2.83□□□□□ -1.96
HCFC2-204ENST00000550335 CACNA1CQ13936 2221 aa2.83□□□□□ -1.96
HCFC2-204ENST00000550335 UNC79Q9P2D8 2635 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 A0A0G2JND7 137 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 FAM236DA0A1B0GTK5 79 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 A0A1B0GW54 56 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 OR4C46A6NHA9 309 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 RFPL4AA6NLU0 287 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 RFPL4AL1F8VTS6 287 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 CREBL2O60519 120 aaPredicted RBP2.82□□□□□ -1.96
HCFC2-204ENST00000550335 MRPL33O75394 65 aaKnown RBP2.82□□□□□ -1.96
HCFC2-204ENST00000550335 C1QCP02747 245 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 FAM236CP0DP71 79 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 AKR1C1Q04828 323 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 DEFB113Q30KQ7 82 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 NCMAPQ5T1S8 102 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 C1orf140Q5VVS0 124 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 ZNF767PQ75MW2 155 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 OR4X2Q8NGF9 303 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 CEP19Q96LK0 163 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 IMMP2LQ96T52 175 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 PHB2Q99623 299 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 HOPXQ9BPY8 73 aaPredicted RBP2.82□□□□□ -1.96
HCFC2-204ENST00000550335 TMEM147Q9BVK8 224 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 LINC00470Q9BZP3 86 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 EFCAB1Q9HAE3 211 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 NAT8Q9UHE5 227 aa2.82□□□□□ -1.96
HCFC2-204ENST00000550335 ARHGAP32A7KAX9 2087 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 PCNX1Q96RV3 2341 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 TRAV36DV7A0A075B6V5 113 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 A0A1B0GWA3 101 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 TRAPPC13A5PLN9 417 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 H3BT86 120 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 FXYD1O00168 92 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 LEPROTO15243 131 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 TPST1O60507 370 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 UCHL1P09936 223 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 HLA-DMBP28068 263 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 RPS20P60866 119 aaKnown RBP2.81□□□□□ -1.96
HCFC2-204ENST00000550335 NCALDP61601 193 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 POLR2GP62487 172 aaKnown RBP eCLIP2.81□□□□□ -1.96
HCFC2-204ENST00000550335 SELENOWP63302 87 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 RUNX1Q01196 453 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 TMEM97Q5BJF2 176 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 ZNF705AQ6ZN79 300 aaPredicted RBP2.81□□□□□ -1.96
HCFC2-204ENST00000550335 AAED1Q7RTV5 226 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 C10orf111Q8N326 155 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 OR5J2Q8NH18 312 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 C10orf82Q8WW14 230 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 POP5Q969H6 163 aaKnown RBP2.81□□□□□ -1.96
HCFC2-204ENST00000550335 MUCL1Q96DR8 90 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 BTF3L4Q96K17 158 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 SIGMAR1Q99720 223 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 RBM7Q9Y580 266 aaKnown RBP2.81□□□□□ -1.96
HCFC2-204ENST00000550335 KIAA1549Q9HCM3 1950 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 FREM3P0C091 2139 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 PKDREJQ9NTG1 2253 aa2.81□□□□□ -1.96
HCFC2-204ENST00000550335 INTS1Q8N201 2190 aaKnown RBP2.8□□□□□ -1.96
HCFC2-204ENST00000550335 MED12LQ86YW9 2145 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 IGKV1D-42A0A075B6H8 117 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 DPRXA6NFQ7 191 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 J3QRE1 110 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 OR5F1O95221 314 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 TTRP02766 147 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 TSPAN19P0C672 248 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 ASAH2BP0C7U1 165 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 LGALS3P17931 250 aaKnown RBP2.8□□□□□ -1.96
HCFC2-204ENST00000550335 MIAQ16674 131 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 ZNF181Q2M3W8 571 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 KRTAP21-3Q3LHN1 58 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 OR8B12Q8NGG6 310 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 LZICQ8WZA0 190 aa2.8□□□□□ -1.96
HCFC2-204ENST00000550335 BORCS7Q96B45 105 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms