RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SSSCA1O60232 199 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 TSC22D2O75157 780 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 TAS2R30P59541 319 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 FCN2Q15485 313 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 TEPPQ6URK8 271 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 LCN15Q6UWW0 184 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 PATE2Q6UY27 113 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 ZNF546Q86UE3 836 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 CCDC190Q86UF4 302 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 OR10P1Q8NGE3 313 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 OR10J6PQ8NGY7 276 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 RNF141Q8WVD5 230 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 RPUSD4Q96CM3 377 aaKnown RBP5.32□□□□□ -1.56
NEK3-201ENST00000550331 SLC50A1Q9BRV3 221 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 GGACTQ9BVM4 153 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 ARL6Q9H0F7 186 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 ARV1Q9H2C2 271 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 NPVFQ9HCQ7 196 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 MGAT4CQ9UBM8 478 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 LINC00588Q9Y4M8 146 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
NEK3-201ENST00000550331 CCNKO75909 580 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 NDUFB6O95139 128 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 OR4E1P0C645 316 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 HTN1P15515 57 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 ANXA7P20073 488 aaKnown RBP5.31□□□□□ -1.56
NEK3-201ENST00000550331 RRAS2P62070 204 aaPredicted RBP5.31□□□□□ -1.56
NEK3-201ENST00000550331 SLC38A11Q08AI6 406 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 CLINT1Q14677 625 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 SSX7Q7RTT5 188 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 LINC00305Q7Z4B0 112 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 BPIFA4PQ86YQ2 179 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 LINC00612Q8N6U2 182 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 ZNF503Q96F45 646 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 SRRQ9GZT4 340 aa5.31□□□□□ -1.56
NEK3-201ENST00000550331 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
NEK3-201ENST00000550331 H3BNG1 76 aa5.3□□□□□ -1.56
NEK3-201ENST00000550331 GOSR2O14653 212 aa5.3□□□□□ -1.56
NEK3-201ENST00000550331 BTF3P20290 206 aaKnown RBP5.3□□□□□ -1.56
NEK3-201ENST00000550331 IAH1Q2TAA2 248 aaPredicted RBP5.3□□□□□ -1.56
NEK3-201ENST00000550331 SPANXN2Q5MJ10 180 aa5.3□□□□□ -1.56
NEK3-201ENST00000550331 TRIQKQ629K1 86 aa5.3□□□□□ -1.56
NEK3-201ENST00000550331 GNPNAT1Q96EK6 184 aaPredicted RBP5.3□□□□□ -1.56
NEK3-201ENST00000550331 ODF3Q96PU9 254 aa5.3□□□□□ -1.56
NEK3-201ENST00000550331 UPK3BQ9BT76 320 aa5.3□□□□□ -1.56
NEK3-201ENST00000550331 NOP10Q9NPE3 64 aaKnown RBP5.3□□□□□ -1.56
NEK3-201ENST00000550331 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 TRAV26-1A0A087WT03 109 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 A0A1W2PPQ1 181 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 AGPAT2O15120 278 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 COX7A2P2O60397 106 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 RLN2P04090 185 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 IGLC2P0DOY2 106 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 M6PRP20645 277 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 INPP1P49441 399 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 SUMO1P63165 101 aaKnown RBP5.29□□□□□ -1.56
NEK3-201ENST00000550331 OR5I1Q13606 314 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 GUK1Q16774 197 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 GFI1BQ5VTD9 330 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 CCDC28AQ8IWP9 274 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 ZBTB8BQ8NAP8 495 aaPredicted RBP5.29□□□□□ -1.56
NEK3-201ENST00000550331 RXFP4Q8TDU9 374 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 MITD1Q8WV92 249 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 TMEM37Q8WXS4 190 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 MGST2Q99735 147 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 Q9H3A6 140 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 Q9H8V8 135 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 FLVCR2Q9UPI3 526 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 RCL1Q9Y2P8 373 aaKnown RBP5.29□□□□□ -1.56
NEK3-201ENST00000550331 PXMP4Q9Y6I8 212 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 FAT1Q14517 4588 aa5.29□□□□□ -1.56
NEK3-201ENST00000550331 C7orf66A4D0T2 115 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 CENPXA8MT69 81 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 SNURFLB1AK76 121 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 PRAC2D3DTV9 90 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 ZNF701M0R085 212 aaPredicted RBP5.28□□□□□ -1.56
NEK3-201ENST00000550331 SLC17A3O00476 420 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 ZNF253O75346 499 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 MBPP02686 304 aaPredicted RBP5.28□□□□□ -1.56
NEK3-201ENST00000550331 BTCP35070 178 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 LEPP41159 167 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 ARL16Q0P5N6 197 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 RAB31Q13636 194 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 KIR3DS1Q14943 382 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 OPCMLQ14982 345 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 BAK1Q16611 211 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 CNPY1Q3B7I2 92 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 MORN5Q5VZ52 161 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 C10orf113Q5VZT2 155 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 Q6ZRG5 221 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 MRPL53Q96EL3 112 aaKnown RBP5.28□□□□□ -1.56
NEK3-201ENST00000550331 SAT2Q96F10 170 aaPredicted RBP5.28□□□□□ -1.56
NEK3-201ENST00000550331 C18orf15Q96N68 181 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 PYGO2Q9BRQ0 406 aa5.28□□□□□ -1.56
NEK3-201ENST00000550331 RBM38Q9H0Z9 239 aaKnown RBP5.28□□□□□ -1.56
NEK3-201ENST00000550331 MRPS16Q9Y3D3 137 aaKnown RBP5.28□□□□□ -1.56
NEK3-201ENST00000550331 GAGE12BA1L429 117 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms