RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	HOXD3	P31249	432 aa	Predicted RBP	11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	SLURP1	P55000	103 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	FAM106A	Q4KMX7	169 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	LINC01551	Q86U37	167 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	GLMP	Q8WWB7	406 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285		A0A1W2PRX2	142 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	ISLR	O14498	428 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	TCF21	O43680	179 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	S100A2	P29034	98 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	CENPW	Q5EE01	88 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	C5orf17	Q8NAS9	161 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	NHLRC2	Q8NBF2	726 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	KLHL30-AS1	Q8NEE0	82 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	JMJD8	Q96S16	334 aa		11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	DAZ1	Q9NQZ3	744 aa	Known RBP	11.07	□□□□□ -0.64
PDE1B-206	ENST00000550285	TRAV8-1	A0A0A6YYK1	113 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	IGHV7-4-1	A0A0J9YVY3	117 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	TSTD3	H0UI37	97 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285		K7EN84	100 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	TCRA	P04437	139 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	C1orf194	Q5T5A4	169 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	C8orf86	Q6ZUL3	223 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	OR11H1	Q8NG94	326 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	ASCL2	Q99929	193 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	RHPN1-AS1	Q9BWJ2	59 aa		11.06	□□□□□ -0.64
PDE1B-206	ENST00000550285	TMEM213	A2RRL7	107 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	CITED2	Q99967	270 aa	Predicted RBP	11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	CTDSP1	Q9GZU7	261 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	RNF24	Q9Y225	148 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	CHEK1	O14757	476 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	CXCL1	P09341	107 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	S100A7	P31151	101 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	GALR1	P47211	349 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	PDE6H	Q13956	83 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	GOLT1A	Q6ZVE7	132 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	RNF182	Q8N6D2	247 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	C4orf3	Q8WVX3	66 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	IGF2BP2-AS1	Q96M15	143 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	SMPX	Q9UHP9	88 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	RNF114	Q9Y508	228 aa		11.05	□□□□□ -0.64
PDE1B-206	ENST00000550285	C2CD3	Q4AC94	2353 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	IGKV3-7	A0A075B6H7	116 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	IGLV2-8	P01709	118 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	PCP4	P48539	62 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	OR5I1	Q13606	314 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	CMTM2	Q8TAZ6	248 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	ATG101	Q9BSB4	218 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	URGCP-MRPS24	S4R325	110 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285		A0A087X0K7	114 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	NDUFA7	O95182	113 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	RPS10	P46783	165 aa	Known RBP	11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	GNG4	P50150	75 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	CNN1	P51911	297 aa	Known RBP	11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	NUTF2	P61970	127 aa	Known RBP	11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	LYPD1	Q8N2G4	141 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	GPR82	Q96P67	336 aa		11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	TEP1	Q99973	2627 aa	Known RBP	11.04	□□□□□ -0.64
PDE1B-206	ENST00000550285	TRAV8-2	A0A0B4J237	113 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285		C9JCJ5	164 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285		K7EMT4	169 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	PROK1	P58294	105 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	KLF5	Q13887	457 aa	Predicted RBP	11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	OR1N2	Q8NGR9	330 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	IGLV2-11	P01706	119 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	KRTAP10-3	P60369	221 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	RPL11	P62913	178 aa	Known RBP	11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	PSG9	Q00887	426 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	AAMDC	Q9H7C9	122 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	UFC1	Q9Y3C8	167 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	KLF12	Q9Y4X4	402 aa		11.03	□□□□□ -0.64
PDE1B-206	ENST00000550285	IFITM10	A6NMD0	228 aa		11.02	□□□□□ -0.65
PDE1B-206	ENST00000550285	DIRC3	C9JPN6	131 aa		11.02	□□□□□ -0.65
PDE1B-206	ENST00000550285	LINC01619	G3V211	115 aa		11.02	□□□□□ -0.65
PDE1B-206	ENST00000550285	TMEM183B	Q1AE95	376 aa		11.02	□□□□□ -0.65
PDE1B-206	ENST00000550285	TRBV24-1	A0A075B6N3	115 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285		A0A1W2PS18	150 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	PRAC2	D3DTV9	90 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	IGKV2D-40	P01614	121 aa	Predicted RBP	11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	ADAMTSL5	Q6ZMM2	481 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	BAGE2	Q86Y30	109 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	DLX4	Q92988	240 aa	Predicted RBP	11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	RAX2	Q96IS3	184 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	LGALS9	O00182	355 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	MGST1	P10620	155 aa	Known RBP	11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	UBE2G1	P62253	170 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	DPF1	Q92782	380 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	JMJD1C	Q15652	2540 aa		11.01	□□□□□ -0.65
PDE1B-206	ENST00000550285	WNK1	Q9H4A3	2382 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285		A8MWP6	167 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285	ZNF253	O75346	499 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285	CBLN1	P23435	193 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285	LCN12	Q6JVE5	192 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285	GBGT1	Q8N5D6	347 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285	GRAMD2B	Q96HH9	432 aa		11	□□□□□ -0.65
PDE1B-206	ENST00000550285	FAM210B	Q96KR6	192 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms