RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TMUB2Q71RG4 321 aa16.42■□□□□ 0.22
BRF1-216ENST00000550208 EXOC3-AS1Q8N2X6 119 aa16.42■□□□□ 0.22
BRF1-216ENST00000550208 CSNK1G2-AS1Q8NCQ2 148 aa16.42■□□□□ 0.22
BRF1-216ENST00000550208 AMTNQ6UX39 209 aa16.41■□□□□ 0.22
BRF1-216ENST00000550208 AKAP14Q86UN6 197 aa16.41■□□□□ 0.22
BRF1-216ENST00000550208 OR11H2Q8NH07 326 aa16.41■□□□□ 0.22
BRF1-216ENST00000550208 RARRES2Q99969 163 aa16.41■□□□□ 0.22
BRF1-216ENST00000550208 M0R3E3 92 aa16.4■□□□□ 0.22
BRF1-216ENST00000550208 CDC34P49427 236 aaPredicted RBP16.4■□□□□ 0.22
BRF1-216ENST00000550208 CD300CQ08708 224 aa16.4■□□□□ 0.22
BRF1-216ENST00000550208 RAB24Q969Q5 203 aa16.4■□□□□ 0.22
BRF1-216ENST00000550208 STAB2Q8WWQ8 2551 aa16.4■□□□□ 0.22
BRF1-216ENST00000550208 KANTRA0A1W2PQU2 76 aa16.39■□□□□ 0.21
BRF1-216ENST00000550208 BCL2L11O43521 198 aa16.39■□□□□ 0.21
BRF1-216ENST00000550208 C1QBP02746 253 aa16.39■□□□□ 0.21
BRF1-216ENST00000550208 UBE2L3P68036 154 aaKnown RBP16.39■□□□□ 0.21
BRF1-216ENST00000550208 ICAM4Q14773 271 aa16.39■□□□□ 0.21
BRF1-216ENST00000550208 LGALSLQ3ZCW2 172 aaPredicted RBP16.39■□□□□ 0.21
BRF1-216ENST00000550208 PHYHIPLQ96FC7 376 aa16.39■□□□□ 0.21
BRF1-216ENST00000550208 C1QTNF4Q9BXJ3 329 aa16.39■□□□□ 0.21
BRF1-216ENST00000550208 ACTR3CQ9C0K3 210 aaPredicted RBP16.39■□□□□ 0.21
BRF1-216ENST00000550208 STAG3L2P0CL84 134 aa16.38■□□□□ 0.21
BRF1-216ENST00000550208 STAG3L3P0CL85 134 aa16.38■□□□□ 0.21
BRF1-216ENST00000550208 RANP62826 216 aaKnown RBP16.38■□□□□ 0.21
BRF1-216ENST00000550208 PQLC2Q6ZP29 291 aa16.38■□□□□ 0.21
BRF1-216ENST00000550208 MRPL53Q96EL3 112 aaKnown RBP16.38■□□□□ 0.21
BRF1-216ENST00000550208 ZNF471Q9BX82 626 aaPredicted RBP16.38■□□□□ 0.21
BRF1-216ENST00000550208 PRELID1Q9Y255 219 aa16.38■□□□□ 0.21
BRF1-216ENST00000550208 SSX7Q7RTT5 188 aa16.37■□□□□ 0.21
BRF1-216ENST00000550208 AAMDCQ9H7C9 122 aa16.37■□□□□ 0.21
BRF1-216ENST00000550208 PFDN1O60925 122 aa16.36■□□□□ 0.21
BRF1-216ENST00000550208 OR10J6PQ8NGY7 276 aa16.36■□□□□ 0.21
BRF1-216ENST00000550208 PLA2G2EQ9NZK7 142 aa16.36■□□□□ 0.21
BRF1-216ENST00000550208 A0A0J9YWU9 116 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 M0R2Z0 102 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 ARL14EPLP0DKL9 152 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 ZNF726P1Q15940 193 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 SPINK13Q1W4C9 94 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 AKR1C8PQ5T2L2 129 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 HYLS1Q96M11 299 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 Q9H3A6 140 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 PPP1R14DQ9NXH3 145 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 X6R8D5 127 aa16.35■□□□□ 0.21
BRF1-216ENST00000550208 ZNF705EA8MWA4 302 aaPredicted RBP16.34■□□□□ 0.21
BRF1-216ENST00000550208 LYPD1Q8N2G4 141 aa16.34■□□□□ 0.21
BRF1-216ENST00000550208 GCHFRP30047 84 aa16.33■□□□□ 0.2
BRF1-216ENST00000550208 ERCC8Q13216 396 aa16.33■□□□□ 0.2
BRF1-216ENST00000550208 NPIPB6E9PJ23 425 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 BOLA2-SMG1P6H3BVE0 249 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 DEFB4AO15263 64 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 CRXO43186 299 aaPredicted RBP16.32■□□□□ 0.2
BRF1-216ENST00000550208 SEC11BP0C7V7 166 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 CT45A10P0DMU9 189 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 BAP18Q8IXM2 172 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 C1orf158Q8N1D5 194 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 IGF2BP2-AS1Q96M15 143 aa16.32■□□□□ 0.2
BRF1-216ENST00000550208 TRAV12-2A0A075B6T6 113 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 IGHV3OR16-12A0A075B7B8 117 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 CTXND1A0A1B0GTU2 59 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 PGPA6NDG6 321 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 CXorf1O96002 111 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 AMBPP02760 352 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 EIF5AP63241 154 aaKnown RBP16.31■□□□□ 0.2
BRF1-216ENST00000550208 ZNF705AQ6ZN79 300 aaPredicted RBP16.31■□□□□ 0.2
BRF1-216ENST00000550208 SUN5Q8TC36 379 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 AGPAT4-IT1Q9H0P7 198 aa16.31■□□□□ 0.2
BRF1-216ENST00000550208 IGKV2-40A0A087WW87 121 aaPredicted RBP16.3■□□□□ 0.2
BRF1-216ENST00000550208 IGKV2D-40P01614 121 aaPredicted RBP16.3■□□□□ 0.2
BRF1-216ENST00000550208 Q8NAQ8 132 aa16.3■□□□□ 0.2
BRF1-216ENST00000550208 MUC7Q8TAX7 377 aa16.3■□□□□ 0.2
BRF1-216ENST00000550208 OTORQ9NRC9 128 aa16.3■□□□□ 0.2
BRF1-216ENST00000550208 IGHV4-28A0A0C4DH34 117 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 RBMY1A1P0DJD3 496 aaKnown RBP16.29■□□□□ 0.2
BRF1-216ENST00000550208 RBMY1CP0DJD4 496 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 TPT1P13693 172 aaKnown RBP16.29■□□□□ 0.2
BRF1-216ENST00000550208 CSN1S1P47710 185 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 FHITP49789 147 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 KIR3DS1Q14943 382 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 RBMY1FQ15415 496 aaKnown RBP16.29■□□□□ 0.2
BRF1-216ENST00000550208 VGLL1Q99990 258 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 TMPRSS5Q9H3S3 457 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 GOLT1BQ9Y3E0 138 aa16.29■□□□□ 0.2
BRF1-216ENST00000550208 MIFP14174 115 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 CDKN1BP46527 198 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 FGF8P55075 233 aaPredicted RBP16.28■□□□□ 0.2
BRF1-216ENST00000550208 ZFP69Q49AA0 526 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 C9orf47Q6ZRZ4 202 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 STOML3Q8TAV4 291 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 TMED6Q8WW62 240 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 LINC00477Q96M19 166 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 TMEM167BQ9NRX6 74 aa16.28■□□□□ 0.2
BRF1-216ENST00000550208 IQCF2Q8IXL9 164 aa16.27■□□□□ 0.2
BRF1-216ENST00000550208 C9orf62Q8N4C0 152 aa16.27■□□□□ 0.2
BRF1-216ENST00000550208 RXFP4Q8TDU9 374 aa16.27■□□□□ 0.2
BRF1-216ENST00000550208 NEU1Q99519 415 aa16.27■□□□□ 0.2
BRF1-216ENST00000550208 DIRC3C9JPN6 131 aa16.26■□□□□ 0.19
BRF1-216ENST00000550208 INSP01308 110 aa16.26■□□□□ 0.19
BRF1-216ENST00000550208 TSPOP30536 169 aa16.26■□□□□ 0.19
BRF1-216ENST00000550208 IL17DQ8TAD2 202 aa16.26■□□□□ 0.19
BRF1-216ENST00000550208 ODF3Q96PU9 254 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms