RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BAP18Q8IXM2 172 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 C6orf223Q8N319 242 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 KCNRGQ8N5I3 272 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 ZNF738Q8NE65 137 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 KRTAP4-5Q9BYR2 181 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-218ENST00000548945 LYRM2Q9NU23 88 aaPredicted RBP9.02□□□□□ -0.97
PTCH1-218ENST00000548945 LRP1BQ9NZR2 4599 aa9.02□□□□□ -0.97
PTCH1-218ENST00000548945 A0A087X0K7 114 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 F5H768 121 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 TSC22D2O75157 780 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 S100A11P31949 105 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 CAV2P51636 162 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 CCL18P55774 89 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 TAS2R60P59551 318 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 SELENOTP62341 195 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 TNP2Q05952 138 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 CYP2G1PQ6ZSU1 146 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 TMUB2Q71RG4 321 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 C16orf74Q96GX8 76 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 SMIM8Q96KF7 97 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 SLC25A31Q9H0C2 315 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 ARL6Q9H0F7 186 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 HIGD1AQ9Y241 93 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 BOLA1Q9Y3E2 137 aa9.01□□□□□ -0.97
PTCH1-218ENST00000548945 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 HYPMO75409 117 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 NUDT3O95989 172 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 PRM2P04554 102 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 AZU1P20160 251 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 OPCMLQ14982 345 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 IGFL4Q6B9Z1 124 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 ZNF493Q6ZR52 646 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 STX12Q86Y82 276 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 OR8A1Q8NGG7 326 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 LINC01587Q99440 93 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 PSENENQ9NZ42 101 aa9□□□□□ -0.97
PTCH1-218ENST00000548945 TIMM8BQ9Y5J9 83 aaPredicted RBP9□□□□□ -0.97
PTCH1-218ENST00000548945 TRAV12-2A0A075B6T6 113 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 H3BP45 60 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 TAAR5O14804 337 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 BCL2L11O43521 198 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 RHOBP62745 196 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 HIST1H1AQ02539 215 aaPredicted RBP8.99□□□□□ -0.97
PTCH1-218ENST00000548945 BAXQ07812 192 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 PSG3Q16557 428 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 TMEM252Q8N6L7 170 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 ARPC5LQ9BPX5 153 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 PPP1R14DQ9NXH3 145 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 LINC00588Q9Y4M8 146 aa8.99□□□□□ -0.97
PTCH1-218ENST00000548945 IGSF23A1L1A6 192 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 SMCO3A2RU48 225 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 FAM24AA6NFZ4 105 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 FNDC10F2Z333 226 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 LINC00869P0C866 280 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 CDKN1BP46527 198 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 OR10J6PQ8NGY7 276 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
PTCH1-218ENST00000548945 ZNF503Q96F45 646 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 C20orf144Q9BQM9 153 aa8.98□□□□□ -0.97
PTCH1-218ENST00000548945 OR5G3P0C626 314 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 SULT1A1P50225 295 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 DLK1P80370 383 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 CLINT1Q14677 625 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 PXDC1Q5TGL8 231 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 TMEM14EPQ6UXP3 125 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 SLC51BQ86UW2 128 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 LRRC20Q8TCA0 184 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 RNASE8Q8TDE3 154 aaKnown RBP8.97□□□□□ -0.97
PTCH1-218ENST00000548945 RNF141Q8WVD5 230 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 UHRF2Q96PU4 802 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 NPVFQ9HCQ7 196 aa8.97□□□□□ -0.97
PTCH1-218ENST00000548945 PMS2P5A8MQ11 134 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 H7BYZ3 331 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 MRPS12O15235 138 aaKnown RBP8.96□□□□□ -0.98
PTCH1-218ENST00000548945 EIF5AP63241 154 aaKnown RBP8.96□□□□□ -0.98
PTCH1-218ENST00000548945 HBG1P69891 147 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 HBG2P69892 147 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 NHLH2Q02577 135 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 LCN15Q6UWW0 184 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 LINC00612Q8N6U2 182 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
PTCH1-218ENST00000548945 SLC50A1Q9BRV3 221 aa8.96□□□□□ -0.98
PTCH1-218ENST00000548945 ZNF471Q9BX82 626 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-218ENST00000548945 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
PTCH1-218ENST00000548945 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
PTCH1-218ENST00000548945 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 BORCS7-ASMTA0A0B4J1R7 106 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 CST7O76096 145 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 METTL15P1P0C7V9 234 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 HTN1P15515 57 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 BTF3P20290 206 aaKnown RBP8.95□□□□□ -0.98
PTCH1-218ENST00000548945 ZNF266Q14584 549 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 TEPPQ6URK8 271 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms