RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 C5P01031 1676 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 LMO7Q8WWI1 1683 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 COL7A1Q02388 2944 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 LRRC37A2A6NM11 1700 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 IFT172Q9UG01 1749 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 DOPEY2Q9Y3R5 2298 aa0.33□□□□□ -2.36
CCDC38-206ENST00000548771 PKD1P98161 4303 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 COL14A1Q05707 1796 aaKnown RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 OVOS2A0A0G2JMS6 1433 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 OVOS2A0A0J9YW53 1432 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CCDC144AA2RUR9 1427 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 OVOS2Q6IE36 1432 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 YTHDC2Q9H6S0 1430 aaKnown RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 RRBP1Q9P2E9 1410 aaKnown RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CLTCL1P53675 1640 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 TRPM1Q7Z4N2 1603 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 MAP2P11137 1827 aaKnown RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 ASXL3Q9C0F0 2248 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 DNAH6Q9C0G6 4158 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 A0A1W2PPM0 123 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CETN3O15182 167 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 DNAL4O96015 105 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 HIST1H1TP22492 207 aaPredicted RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 RPS20P60866 119 aaKnown RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 HIST3H3Q16695 136 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 SOSTDC1Q6X4U4 206 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CLECL1Q8IZS7 167 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 TMEM86BQ8N661 226 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 OR13D1Q8NGV5 346 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 OR10J5Q8NHC4 309 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 TMEM70Q9BUB7 260 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 NHP2Q9NX24 153 aaKnown RBP0.32□□□□□ -2.36
CCDC38-206ENST00000548771 HS3ST2Q9Y278 367 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 TMEM56-RWDD3S4R434 201 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CCDC18Q5T9S5 1454 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 MYCBP2O75592 4640 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 STARD9Q9P2P6 4700 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CEP192Q8TEP8 1941 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 CEP152O94986 1710 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 ACANP16112 2415 aa0.32□□□□□ -2.36
CCDC38-206ENST00000548771 WNK3Q9BYP7 1800 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 DYNC1H1Q14204 4646 aaKnown RBP0.31□□□□□ -2.36
CCDC38-206ENST00000548771 DNAH10Q8IVF4 4471 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 ZNF609O15014 1411 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 TNS3Q68CZ2 1445 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 NSD3Q9BZ95 1437 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 MGAM2Q2M2H8 2515 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 UBR3Q6ZT12 1888 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 TRPM7Q96QT4 1865 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 ALS2Q96Q42 1657 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 MRC1P22897 1456 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 PRXQ9BXM0 1461 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 PLECQ15149 4684 aaKnown RBP0.31□□□□□ -2.36
CCDC38-206ENST00000548771 A0A0G2JMZ2 1700 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 LY75O60449 1722 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 TJP1Q07157 1748 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 MON2Q7Z3U7 1717 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 ZNF736B4DX44 427 aaPredicted RBP0.31□□□□□ -2.36
CCDC38-206ENST00000548771 HIST1H1EP10412 219 aaKnown RBP0.31□□□□□ -2.36
CCDC38-206ENST00000548771 RPL5P46777 297 aaKnown RBP0.31□□□□□ -2.36
CCDC38-206ENST00000548771 CDC42P60953 191 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 DEFB113Q30KQ7 82 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 CCDC122Q5T0U0 273 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 GKN2Q86XP6 184 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 C3orf56Q8N813 242 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 OR52R1Q8NGF1 315 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 GUCA1BQ9UMX6 200 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 CDC42BPGQ6DT37 1551 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 CACNA1EQ15878 2313 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 FER1L6Q2WGJ9 1857 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 MTUS2Q5JR59 1369 aa0.31□□□□□ -2.36
CCDC38-206ENST00000548771 PKHD1L1Q86WI1 4243 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 CEP162Q5TB80 1403 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 VPS13BQ7Z7G8 4022 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 C4AP0C0L4 1744 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 C4BP0C0L5 1744 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 DOT1LQ8TEK3 1739 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 DNAH2Q9P225 4427 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 RGPD8O14715 1765 aaPredicted RBP0.3□□□□□ -2.36
CCDC38-206ENST00000548771 LTN1O94822 1766 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 BCORQ6W2J9 1755 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 CSPG4Q6UVK1 2322 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 ABCC6O95255 1503 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 TAF1LQ8IZX4 1826 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 VPS13DQ5THJ4 4388 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 LRP2P98164 4655 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 COTL1Q14019 142 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 FAM74A1Q5RGS3 127 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 DCUN1D1Q96GG9 259 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 CCDC90BQ9GZT6 254 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 C6orf62Q9GZU0 229 aaPredicted RBP0.3□□□□□ -2.36
CCDC38-206ENST00000548771 OR51V1Q9H2C8 321 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 EPDR1Q9UM22 224 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 FAT1Q14517 4588 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 ZFC3H1O60293 1989 aaKnown RBP0.3□□□□□ -2.36
CCDC38-206ENST00000548771 APC2O95996 2303 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 CDC42BPAQ5VT25 1732 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 NAIPQ13075 1403 aa0.3□□□□□ -2.36
CCDC38-206ENST00000548771 KIAA1107Q9UPP5 1409 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms