RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PXMP4Q9Y6I8 212 aa9.96□□□□□ -0.82
PTCH1-217ENST00000548420 IGLC2P0DOY2 106 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 PSG9Q00887 426 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 PSG3Q16557 428 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF705AQ6ZN79 300 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-217ENST00000548420 RNF182Q8N6D2 247 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-217ENST00000548420 NEU1Q99519 415 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 WDR61Q9GZS3 305 aaKnown RBP9.95□□□□□ -0.82
PTCH1-217ENST00000548420 HRH4Q9H3N8 390 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF331Q9NQX6 463 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-217ENST00000548420 HSPB11Q9Y547 144 aa9.95□□□□□ -0.82
PTCH1-217ENST00000548420 TRAV10A0A0B4J240 114 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 TRAV5A0A0B4J249 113 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF705FA8MVS1 300 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-217ENST00000548420 H3BQ15 152 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 IGKV3-20P01619 116 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 AMBPP02760 352 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF705DP0CH99 300 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF705BP0CI00 300 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-217ENST00000548420 RPL12P30050 165 aaKnown RBP9.94□□□□□ -0.82
PTCH1-217ENST00000548420 FGL1Q08830 312 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 CLINT1Q14677 625 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 LCN15Q6UWW0 184 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 OR11H7Q8NGC8 314 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 OR4B1Q8NGF8 309 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 THAP6Q8TBB0 222 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 SLC35B3Q9H1N7 401 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 MBD2Q9UBB5 411 aa9.94□□□□□ -0.82
PTCH1-217ENST00000548420 IGHV4-28A0A0C4DH34 117 aa9.93□□□□□ -0.82
PTCH1-217ENST00000548420 DUSP14O95147 198 aaKnown RBP9.93□□□□□ -0.82
PTCH1-217ENST00000548420 FCN2Q15485 313 aa9.93□□□□□ -0.82
PTCH1-217ENST00000548420 ATP5SQ99766 215 aa9.93□□□□□ -0.82
PTCH1-217ENST00000548420 SLC50A1Q9BRV3 221 aa9.93□□□□□ -0.82
PTCH1-217ENST00000548420 TMEM14CQ9P0S9 112 aa9.93□□□□□ -0.82
PTCH1-217ENST00000548420 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
PTCH1-217ENST00000548420 CNN1P51911 297 aaKnown RBP9.92□□□□□ -0.82
PTCH1-217ENST00000548420 FXYD7P58549 80 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 OXA1LQ15070 435 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 GUK1Q16774 197 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 GCSAMLQ5JQS6 135 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 LRRC20Q8TCA0 184 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 PARD6GQ9BYG4 376 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-217ENST00000548420 MED28Q9H204 178 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
PTCH1-217ENST00000548420 SMIM9A6NGZ8 99 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 SLC17A3O00476 420 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF253O75346 499 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 SYT8Q8NBV8 401 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 ZNF738Q8NE65 137 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 ASB13Q8WXK3 278 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 FRZBQ92765 325 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 FAM167A-AS1Q96KT0 104 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 WFDC1Q9HC57 220 aa9.91□□□□□ -0.82
PTCH1-217ENST00000548420 CRXO43186 299 aaPredicted RBP9.9□□□□□ -0.82
PTCH1-217ENST00000548420 SNRPCP09234 159 aaKnown RBP9.9□□□□□ -0.82
PTCH1-217ENST00000548420 HIST1H1EP10412 219 aaKnown RBP9.9□□□□□ -0.82
PTCH1-217ENST00000548420 RGS21Q2M5E4 152 aa9.9□□□□□ -0.82
PTCH1-217ENST00000548420 RPUSD4Q96CM3 377 aaKnown RBP9.9□□□□□ -0.82
PTCH1-217ENST00000548420 IGF2BP2-AS1Q96M15 143 aa9.9□□□□□ -0.82
PTCH1-217ENST00000548420 KRTAP9-2Q9BYQ4 174 aa9.9□□□□□ -0.82
PTCH1-217ENST00000548420 KCNIP2Q9NS61 270 aa9.9□□□□□ -0.82
PTCH1-217ENST00000548420 LRP1Q07954 4544 aaKnown RBP9.89□□□□□ -0.83
PTCH1-217ENST00000548420 TRBV19A0A075B6N1 114 aa9.89□□□□□ -0.83
PTCH1-217ENST00000548420 H3BTX0 84 aa9.89□□□□□ -0.83
PTCH1-217ENST00000548420 NDUFB4O95168 129 aa9.89□□□□□ -0.83
PTCH1-217ENST00000548420 GIPP09681 153 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-217ENST00000548420 PDE6HQ13956 83 aa9.89□□□□□ -0.83
PTCH1-217ENST00000548420 Q5BKY6 102 aa9.89□□□□□ -0.83
PTCH1-217ENST00000548420 SLC25A2Q9BXI2 301 aa9.89□□□□□ -0.83
PTCH1-217ENST00000548420 PRAC2D3DTV9 90 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 C17orf112F2Z3M2 114 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 IFNA5P01569 189 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 ZNF767PQ75MW2 155 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 MIR17HGQ75NE6 70 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 MRPL53Q96EL3 112 aaKnown RBP9.88□□□□□ -0.83
PTCH1-217ENST00000548420 AQP10Q96PS8 301 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 MRPL32Q9BYC8 188 aaKnown RBP9.88□□□□□ -0.83
PTCH1-217ENST00000548420 SMIM3Q9BZL3 60 aa9.88□□□□□ -0.83
PTCH1-217ENST00000548420 KRTAP9-6A0A140TA67 174 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-217ENST00000548420 M0R2Z0 102 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 PYYP10082 97 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 HIST1H1AQ02539 215 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-217ENST00000548420 SPINK13Q1W4C9 94 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 SCGB1C1Q8TD33 95 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 FUT9Q9Y231 359 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 GOLT1BQ9Y3E0 138 aa9.87□□□□□ -0.83
PTCH1-217ENST00000548420 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
PTCH1-217ENST00000548420 TMEM189A5PLL7 270 aa9.86□□□□□ -0.83
PTCH1-217ENST00000548420 BOLA2-SMG1P6H3BVE0 249 aa9.86□□□□□ -0.83
PTCH1-217ENST00000548420 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-217ENST00000548420 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
PTCH1-217ENST00000548420 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
PTCH1-217ENST00000548420 RFNGQ9Y644 331 aa9.86□□□□□ -0.83
PTCH1-217ENST00000548420 IGHV3OR16-12A0A075B7B8 117 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms