RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 TMEM252Q8N6L7 170 aa15.04■□□□□ -0
USP44-204ENST00000547951 RNASE8Q8TDE3 154 aaKnown RBP15.04■□□□□ -0
USP44-204ENST00000547951 SLC39A9Q9NUM3 307 aa15.04■□□□□ -0
USP44-204ENST00000547951 ZNF586Q9NXT0 402 aa15.04■□□□□ -0
USP44-204ENST00000547951 RNF24Q9Y225 148 aa15.04■□□□□ -0
USP44-204ENST00000547951 J3KRW8 73 aa15.03■□□□□ -0
USP44-204ENST00000547951 CT45A10P0DMU9 189 aa15.03■□□□□ -0
USP44-204ENST00000547951 BAXQ07812 192 aa15.03■□□□□ -0
USP44-204ENST00000547951 RAB31Q13636 194 aa15.03■□□□□ -0
USP44-204ENST00000547951 Q6ZRG5 221 aa15.03■□□□□ -0
USP44-204ENST00000547951 NOP10Q9NPE3 64 aaKnown RBP15.03■□□□□ -0
USP44-204ENST00000547951 PXMP4Q9Y6I8 212 aa15.03■□□□□ -0
USP44-204ENST00000547951 PVALBP20472 110 aaPredicted RBP15.02■□□□□ -0
USP44-204ENST00000547951 GCSAMLQ5JQS6 135 aa15.02■□□□□ -0
USP44-204ENST00000547951 OR10J6PQ8NGY7 276 aa15.02■□□□□ -0
USP44-204ENST00000547951 C16orf74Q96GX8 76 aa15.02■□□□□ -0
USP44-204ENST00000547951 SIX6O95475 246 aa15.01□□□□□ -0.01
USP44-204ENST00000547951 FGF7P21781 194 aa15.01□□□□□ -0.01
USP44-204ENST00000547951 RPL29P47914 159 aaKnown RBP15.01□□□□□ -0.01
USP44-204ENST00000547951 C15orf53Q8NAA6 179 aa15.01□□□□□ -0.01
USP44-204ENST00000547951 OR1L4Q8NGR5 311 aa15.01□□□□□ -0.01
USP44-204ENST00000547951 CBY3A6NI87 242 aa15□□□□□ -0.01
USP44-204ENST00000547951 H7BYZ3 331 aa15□□□□□ -0.01
USP44-204ENST00000547951 M0R3E3 92 aa15□□□□□ -0.01
USP44-204ENST00000547951 ATP5G1P05496 136 aa15□□□□□ -0.01
USP44-204ENST00000547951 S100A11P31949 105 aa15□□□□□ -0.01
USP44-204ENST00000547951 ATP5G3P48201 142 aa15□□□□□ -0.01
USP44-204ENST00000547951 ASAH1Q13510 395 aa15□□□□□ -0.01
USP44-204ENST00000547951 TMEM263Q8WUH6 116 aaKnown RBP15□□□□□ -0.01
USP44-204ENST00000547951 GPN1Q9HCN4 374 aaPredicted RBP15□□□□□ -0.01
USP44-204ENST00000547951 TIMM8BQ9Y5J9 83 aaPredicted RBP15□□□□□ -0.01
USP44-204ENST00000547951 NPIPB6E9PJ23 425 aa14.99□□□□□ -0.01
USP44-204ENST00000547951 NUDT3O95989 172 aa14.99□□□□□ -0.01
USP44-204ENST00000547951 PYYP10082 97 aa14.99□□□□□ -0.01
USP44-204ENST00000547951 STX12Q86Y82 276 aa14.99□□□□□ -0.01
USP44-204ENST00000547951 PFDN5Q99471 154 aa14.99□□□□□ -0.01
USP44-204ENST00000547951 TRAV12-3A0A0B4J271 114 aa14.98□□□□□ -0.01
USP44-204ENST00000547951 NDUFB4O95168 129 aa14.98□□□□□ -0.01
USP44-204ENST00000547951 NHLH2Q02577 135 aa14.98□□□□□ -0.01
USP44-204ENST00000547951 ERCC8Q13216 396 aa14.98□□□□□ -0.01
USP44-204ENST00000547951 MZT2BQ6NZ67 158 aa14.98□□□□□ -0.01
USP44-204ENST00000547951 RNF141Q8WVD5 230 aa14.98□□□□□ -0.01
USP44-204ENST00000547951 TRBV19A0A075B6N1 114 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 HBG1P69891 147 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 HBG2P69892 147 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 IFITM3Q01628 133 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 GUK1Q16774 197 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 ZNF493Q6ZR52 646 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 THAP6Q8TBB0 222 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 CHAC2Q8WUX2 184 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 ATG101Q9BSB4 218 aa14.97□□□□□ -0.01
USP44-204ENST00000547951 LINC00612Q8N6U2 182 aa14.96□□□□□ -0.01
USP44-204ENST00000547951 ZNRF2Q8NHG8 242 aa14.96□□□□□ -0.01
USP44-204ENST00000547951 C20orf144Q9BQM9 153 aa14.96□□□□□ -0.01
USP44-204ENST00000547951 NPCDR1Q9BY65 106 aa14.96□□□□□ -0.01
USP44-204ENST00000547951 OR5AC2Q9NZP5 309 aa14.96□□□□□ -0.01
USP44-204ENST00000547951 H0YIZ8 118 aa14.95□□□□□ -0.02
USP44-204ENST00000547951 EXOC3-AS1Q8N2X6 119 aa14.95□□□□□ -0.02
USP44-204ENST00000547951 TMEM14CQ9P0S9 112 aa14.95□□□□□ -0.02
USP44-204ENST00000547951 LINC00588Q9Y4M8 146 aa14.95□□□□□ -0.02
USP44-204ENST00000547951 GAGE12BA1L429 117 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 ZNF253O75346 499 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 UPK1BO75841 260 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 GAGE7O76087 117 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 GAGE12FP0CL80 117 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 GAGE12GP0CL81 117 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 GAGE12IP0CL82 117 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 HOXA5P20719 270 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 LEPP41159 167 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 ATP6V1FQ16864 119 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 LRRC37A5PQ49AS3 106 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 C1orf134Q5TEV5 83 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 LINC00299Q6ZSB3 139 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 OR5C1Q8NGR4 320 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 BLNKQ8WV28 456 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 S100ZQ8WXG8 99 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 ODF3Q96PU9 254 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 SLC25A2Q9BXI2 301 aa14.94□□□□□ -0.02
USP44-204ENST00000547951 HIST1H1EP10412 219 aaKnown RBP14.93□□□□□ -0.02
USP44-204ENST00000547951 CLINT1Q14677 625 aa14.93□□□□□ -0.02
USP44-204ENST00000547951 MIR17HGQ75NE6 70 aa14.93□□□□□ -0.02
USP44-204ENST00000547951 CCDC28AQ8IWP9 274 aa14.93□□□□□ -0.02
USP44-204ENST00000547951 ENKURQ8TC29 256 aa14.93□□□□□ -0.02
USP44-204ENST00000547951 FAM167A-AS1Q96KT0 104 aa14.93□□□□□ -0.02
USP44-204ENST00000547951 TRAV26-1A0A087WT03 109 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 FAM3BP58499 235 aaPredicted RBP14.92□□□□□ -0.02
USP44-204ENST00000547951 CD300CQ08708 224 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 BTN1A1Q13410 526 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 OR5I1Q13606 314 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 ZNF575Q86XF7 245 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 MRPL53Q96EL3 112 aaKnown RBP14.92□□□□□ -0.02
USP44-204ENST00000547951 AGPAT4-IT1Q9H0P7 198 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 TIMM9Q9Y5J7 89 aa14.92□□□□□ -0.02
USP44-204ENST00000547951 PCLOQ9Y6V0 5065 aa14.91□□□□□ -0.02
USP44-204ENST00000547951 IGKV2-40A0A087WW87 121 aaPredicted RBP14.91□□□□□ -0.02
USP44-204ENST00000547951 A0A0J9YY99 117 aa14.91□□□□□ -0.02
USP44-204ENST00000547951 NBDYA0A0U1RRE5 68 aa14.91□□□□□ -0.02
USP44-204ENST00000547951 MPDU1O75352 247 aa14.91□□□□□ -0.02
USP44-204ENST00000547951 IGKV2D-40P01614 121 aaPredicted RBP14.91□□□□□ -0.02
USP44-204ENST00000547951 Q6ZQT7 251 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms