RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 MLST8Q9BVC4 326 aa12.81□□□□□ -0.36
CHMP1A-204ENST00000547687 TRBV9A0A0B4J1U6 114 aa12.8□□□□□ -0.36
CHMP1A-204ENST00000547687 Q6ZS46 218 aa12.8□□□□□ -0.36
CHMP1A-204ENST00000547687 ZNF502Q8TBZ5 544 aa12.8□□□□□ -0.36
CHMP1A-204ENST00000547687 ZNF414Q96IQ9 312 aa12.8□□□□□ -0.36
CHMP1A-204ENST00000547687 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
CHMP1A-204ENST00000547687 IZUMO1RA6ND01 250 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 SLC35B1P78383 322 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 PYY3Q5JQD4 70 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 Q6YL49 198 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 TMEM89A2RUT3 159 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 IGHG2P01859 326 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 WDR73Q6P4I2 378 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 SIGLEC15Q6ZMC9 328 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
CHMP1A-204ENST00000547687 TRAV41A0A0B4J266 112 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 RNASE1P07998 156 aaKnown RBP12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 CRIP2P52943 208 aaPredicted RBP12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 COX19Q49B96 90 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 OR5R1Q8NH85 324 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 RABAC1Q9UI14 185 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 AMBPP02760 352 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 IGF1P05019 195 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 CLEC3BP05452 202 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 GPR183P32249 361 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 C19orf54Q5BKX5 351 aa12.78□□□□□ -0.36
CHMP1A-204ENST00000547687 TRAV8-1A0A0A6YYK1 113 aa12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 FAM181BA6NEQ2 426 aa12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 IGLV2-11P01706 119 aa12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 Q86TA4 180 aa12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 NOL4LQ96MY1 436 aaPredicted RBP12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 MS4A10Q96PG2 267 aa12.77□□□□□ -0.37
CHMP1A-204ENST00000547687 TRBV6-1A0A0K0K1D8 114 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 BMPR1BO00238 502 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 MT-ND6P03923 174 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 S100A7P31151 101 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 PDE6HQ13956 83 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 LINC00322Q6ZN03 302 aaPredicted RBP12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 TMEM136Q6ZRR5 245 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 PRNTQ86SH4 94 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 ZNF492Q9P255 531 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 IGHV3-35A0A0C4DH35 117 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 K7EQM0 130 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 RAB4BP61018 213 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 EEF1AKMT3Q96AZ1 226 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 DAZAP1Q96EP5 407 aaKnown RBP12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 VPREB3Q9UKI3 123 aa12.76□□□□□ -0.37
CHMP1A-204ENST00000547687 C19orf71A6NCJ1 209 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 CLEC19AQ6UXS0 136 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 TMEM75Q8N9X5 138 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 NUP35Q8NFH5 326 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 PRSS22Q9GZN4 317 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 RPP21Q9H633 154 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 AAMDCQ9H7C9 122 aa12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 ZNF331Q9NQX6 463 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-204ENST00000547687 TRBV7-1A0A0A6YYK4 115 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 GRIFINA4D1Z8 144 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 P01737 135 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 CRISP2P16562 243 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 CCDC140Q96MF4 163 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 GNB4Q9HAV0 340 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 PSG9Q00887 426 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 ATP5G2Q06055 141 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 GBGT1Q8N5D6 347 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 TMEM18Q96B42 140 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 NEU1Q99519 415 aa12.74□□□□□ -0.37
CHMP1A-204ENST00000547687 CMYA5Q8N3K9 4069 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 PPIFP30405 207 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 PSG3Q16557 428 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 RASL11AQ6T310 242 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 PSG8Q9UQ74 426 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 ZFP30Q9Y2G7 519 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 VWFP04275 2813 aa12.73□□□□□ -0.37
CHMP1A-204ENST00000547687 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 A8MWL6 223 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 M0R3E3 92 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 HLA-DQA1P01909 254 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 TMEM95Q3KNT9 176 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 CT83Q5H943 113 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 WIPF2Q8TF74 440 aaPredicted RBP12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 SMAD5-AS1Q9Y6J3 95 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 MGAM2Q2M2H8 2515 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 CSN1S1P47710 185 aa12.72□□□□□ -0.37
CHMP1A-204ENST00000547687 NUPR1O60356 82 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms