RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 UTP20O75691 2785 aaKnown RBP13.19□□□□□ -0.3
TMTC3-202ENST00000547034 CRYBG3Q68DQ2 2970 aa13.19□□□□□ -0.3
TMTC3-202ENST00000547034 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 CRISP2P16562 243 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 Q6YL49 198 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 TMEM89A2RUT3 159 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 PF4V1P10720 104 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 CRIP1P50238 77 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 GDF5OSQ5U4N7 250 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
TMTC3-202ENST00000547034 TCF24Q7RTU0 167 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 GLMPQ8WWB7 406 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
TMTC3-202ENST00000547034 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
TMTC3-202ENST00000547034 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
TMTC3-202ENST00000547034 RBAKDNA6NC62 111 aa13.17□□□□□ -0.3
TMTC3-202ENST00000547034 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
TMTC3-202ENST00000547034 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
TMTC3-202ENST00000547034 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
TMTC3-202ENST00000547034 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
TMTC3-202ENST00000547034 TMEM18Q96B42 140 aa13.17□□□□□ -0.3
TMTC3-202ENST00000547034 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
TMTC3-202ENST00000547034 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 PSMB8P28062 276 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 LINC00310P59036 64 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 S100A12P80511 92 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 OR2D3Q8NGH3 330 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 C8orf49Q96NF6 230 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 PRR25Q96S07 402 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 NIT2Q9NQR4 276 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 CSPG4Q6UVK1 2322 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 APCSP02743 223 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 RAB4BP61018 213 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 OR10J3Q5JRS4 329 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 CYB5R2Q6BCY4 276 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 UNQ9165/PRO28630Q6UXU0 137 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 OR4X2Q8NGF9 303 aa13.16□□□□□ -0.3
TMTC3-202ENST00000547034 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 IGHV3-66A0A0C4DH42 116 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.3
TMTC3-202ENST00000547034 CT45A10P0DMU9 189 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 HBBP68871 147 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 SLAQ13239 276 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 PSMG3-AS1Q96PY0 264 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 CLEC5AQ9NY25 188 aa13.15□□□□□ -0.3
TMTC3-202ENST00000547034 CELSR2Q9HCU4 2923 aa13.14□□□□□ -0.31
TMTC3-202ENST00000547034 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
TMTC3-202ENST00000547034 NUPR1O60356 82 aa13.14□□□□□ -0.31
TMTC3-202ENST00000547034 TMEM95Q3KNT9 176 aa13.14□□□□□ -0.31
TMTC3-202ENST00000547034 IGFL4Q6B9Z1 124 aa13.14□□□□□ -0.31
TMTC3-202ENST00000547034 ASCL2Q99929 193 aa13.14□□□□□ -0.31
TMTC3-202ENST00000547034 VGLL1Q99990 258 aa13.14□□□□□ -0.31
TMTC3-202ENST00000547034 ZNF705FA8MVS1 300 aaPredicted RBP13.13□□□□□ -0.31
TMTC3-202ENST00000547034 J3QKU1 62 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 C8orf86Q6ZUL3 223 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 ZFHX3Q15911 3703 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 CELSR1Q9NYQ6 3014 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 IGHV3OR16-13A0A075B7E8 117 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 IGHV3-74A0A0B4J1X5 117 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 A8MWP6 167 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 HAX1O00165 279 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 PRB4P10163 310 aaPredicted RBP13.13□□□□□ -0.31
TMTC3-202ENST00000547034 JOSD1Q15040 202 aaPredicted RBP13.13□□□□□ -0.31
TMTC3-202ENST00000547034 PGLYRP4Q96LB8 373 aa13.13□□□□□ -0.31
TMTC3-202ENST00000547034 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 SERF1AO75920 110 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 KIAA1644Q3SXP7 199 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 Q6AWC8 147 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 CSMD2Q7Z408 3487 aa13.12□□□□□ -0.31
TMTC3-202ENST00000547034 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 SMAD7O15105 426 aaKnown RBP13.11□□□□□ -0.31
TMTC3-202ENST00000547034 SH2D1AO60880 128 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 GZMBP10144 247 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 SRIP30626 198 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
TMTC3-202ENST00000547034 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 POLQO75417 2590 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 A0A1W2PS18 150 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 PCP4L1A6NKN8 68 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 F2Z2F3 143 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
TMTC3-202ENST00000547034 Q8TAT8 98 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 MYOZ3Q8TDC0 251 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 ZNF702PQ9H963 129 aa13.11□□□□□ -0.31
TMTC3-202ENST00000547034 PEF1Q9UBV8 284 aaKnown RBP13.11□□□□□ -0.31
TMTC3-202ENST00000547034 KMT2BQ9UMN6 2715 aaPredicted RBP13.1□□□□□ -0.31
TMTC3-202ENST00000547034 CAMPP49913 170 aa13.1□□□□□ -0.31
TMTC3-202ENST00000547034 CDPF1Q6NVV7 123 aa13.1□□□□□ -0.31
TMTC3-202ENST00000547034 BAGE3Q86Y29 109 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms