RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CDC34P49427 236 aaPredicted RBP12.29□□□□□ -0.44
LTBR-215ENST00000546296 OR10J6PQ8NGY7 276 aa12.29□□□□□ -0.44
LTBR-215ENST00000546296 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
LTBR-215ENST00000546296 ACTR3CQ9C0K3 210 aaPredicted RBP12.29□□□□□ -0.44
LTBR-215ENST00000546296 PRELID1Q9Y255 219 aa12.29□□□□□ -0.44
LTBR-215ENST00000546296 STAB2Q8WWQ8 2551 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 BCL2L11O43521 198 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 AKR1C8PQ5T2L2 129 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 RPP25LQ8N5L8 163 aaKnown RBP12.28□□□□□ -0.44
LTBR-215ENST00000546296 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
LTBR-215ENST00000546296 SLC35B3Q9H1N7 401 aa12.28□□□□□ -0.44
LTBR-215ENST00000546296 AGRNO00468 2067 aa12.27□□□□□ -0.45
LTBR-215ENST00000546296 A0A1B0GVG6 124 aa12.27□□□□□ -0.45
LTBR-215ENST00000546296 PRAC2D3DTV9 90 aa12.27□□□□□ -0.45
LTBR-215ENST00000546296 C1QBP02746 253 aa12.27□□□□□ -0.45
LTBR-215ENST00000546296 RANP62826 216 aaKnown RBP12.27□□□□□ -0.45
LTBR-215ENST00000546296 ICAM4Q14773 271 aa12.27□□□□□ -0.45
LTBR-215ENST00000546296 RAB24Q969Q5 203 aa12.27□□□□□ -0.45
LTBR-215ENST00000546296 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
LTBR-215ENST00000546296 MRPL53Q96EL3 112 aaKnown RBP12.26□□□□□ -0.45
LTBR-215ENST00000546296 PHYHIPLQ96FC7 376 aa12.26□□□□□ -0.45
LTBR-215ENST00000546296 A8MTW9 85 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 M0R3E3 92 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 AMBPP02760 352 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 ARL14EPLP0DKL9 152 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 AMTNQ6UX39 209 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 HYLS1Q96M11 299 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 EDA2RQ9HAV5 297 aa12.25□□□□□ -0.45
LTBR-215ENST00000546296 A0A0J9YWU9 116 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 CXorf1O96002 111 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 STAG3L2P0CL84 134 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 CSN1S1P47710 185 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 SPINK13Q1W4C9 94 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 LGALSLQ3ZCW2 172 aaPredicted RBP12.24□□□□□ -0.45
LTBR-215ENST00000546296 IQCF2Q8IXL9 164 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 LYPD1Q8N2G4 141 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 Q9H3A6 140 aa12.24□□□□□ -0.45
LTBR-215ENST00000546296 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
LTBR-215ENST00000546296 BOLA2-SMG1P6H3BVE0 249 aa12.23□□□□□ -0.45
LTBR-215ENST00000546296 M0R2Z0 102 aa12.23□□□□□ -0.45
LTBR-215ENST00000546296 TPT1P13693 172 aaKnown RBP12.23□□□□□ -0.45
LTBR-215ENST00000546296 GOLT1BQ9Y3E0 138 aa12.23□□□□□ -0.45
LTBR-215ENST00000546296 CTXND1A0A1B0GTU2 59 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 SEC11BP0C7V7 166 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 GCHFRP30047 84 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 CD300CQ08708 224 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 ZFP69Q49AA0 526 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 FAM74A1Q5RGS3 127 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 TMEM208Q9BTX3 173 aa12.22□□□□□ -0.45
LTBR-215ENST00000546296 PGPA6NDG6 321 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
LTBR-215ENST00000546296 NPIPB6E9PJ23 425 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 INSP01308 110 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 MIFP14174 115 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 TSPOP30536 169 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 ERCC8Q13216 396 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 SSX7Q7RTT5 188 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 MUC7Q8TAX7 377 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 CMTM2Q8TAZ6 248 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 OTORQ9NRC9 128 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
LTBR-215ENST00000546296 TRAV12-2A0A075B6T6 113 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 IGKV2-40A0A087WW87 121 aaPredicted RBP12.2□□□□□ -0.46
LTBR-215ENST00000546296 DEFB4AO15263 64 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 IGKV2D-40P01614 121 aaPredicted RBP12.2□□□□□ -0.46
LTBR-215ENST00000546296 CT45A10P0DMU9 189 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 RXFP4Q8TDU9 374 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 X6R8D5 127 aa12.2□□□□□ -0.46
LTBR-215ENST00000546296 IGHV4-28A0A0C4DH34 117 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 UMAD1C9J7I0 102 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 LEPP41159 167 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 CDKN1BP46527 198 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 ZNF705AQ6ZN79 300 aaPredicted RBP12.19□□□□□ -0.46
LTBR-215ENST00000546296 TMED6Q8WW62 240 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 AGPAT4-IT1Q9H0P7 198 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 RPH3ALQ9UNE2 315 aa12.19□□□□□ -0.46
LTBR-215ENST00000546296 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 J3KRW8 73 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 CRXO43186 299 aaPredicted RBP12.18□□□□□ -0.46
LTBR-215ENST00000546296 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
LTBR-215ENST00000546296 EIF5AL1Q6IS14 154 aaKnown RBP12.18□□□□□ -0.46
LTBR-215ENST00000546296 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 STOML3Q8TAV4 291 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 FAM213BQ8TBF2 198 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 SUN5Q8TC36 379 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 VGLL1Q99990 258 aa12.18□□□□□ -0.46
LTBR-215ENST00000546296 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
LTBR-215ENST00000546296 C3orf84H3BNL1 204 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms