RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RPL12P30050 165 aaKnown RBP5.34□□□□□ -1.55
CPSF7-224ENST00000544990 FXYD7P58549 80 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 DEFB1P60022 68 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 CLINT1Q14677 625 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 PSG3Q16557 428 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 GUK1Q16774 197 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 IGFL4Q6B9Z1 124 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 CEMP1Q6PRD7 247 aaPredicted RBP5.34□□□□□ -1.55
CPSF7-224ENST00000544990 RNF182Q8N6D2 247 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 Q8NAQ8 132 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 THAP6Q8TBB0 222 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 C17orf77Q96MU5 243 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 RNF126Q9BV68 326 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 NPCDR1Q9BY65 106 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 MED28Q9H204 178 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 HRH4Q9H3N8 390 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 PPP1R14DQ9NXH3 145 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 GOLT1BQ9Y3E0 138 aa5.34□□□□□ -1.55
CPSF7-224ENST00000544990 IGHV3OR16-12A0A075B7B8 117 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 LCE6AA0A183 80 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 A8MTW9 85 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 IFNA5P01569 189 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 NPSP0C0P6 89 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 CNN1P51911 297 aaKnown RBP5.33□□□□□ -1.56
CPSF7-224ENST00000544990 RHOBP62745 196 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 OR8A1Q8NGG7 326 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 SCGB1C1Q8TD33 95 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 PHLDA1Q8WV24 401 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-224ENST00000544990 ATP5SQ99766 215 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 WDR61Q9GZS3 305 aaKnown RBP5.33□□□□□ -1.56
CPSF7-224ENST00000544990 SLC35B3Q9H1N7 401 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF331Q9NQX6 463 aaPredicted RBP5.33□□□□□ -1.56
CPSF7-224ENST00000544990 HSPB11Q9Y547 144 aa5.33□□□□□ -1.56
CPSF7-224ENST00000544990 TRAV5A0A0B4J249 113 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 TMEM189A5PLL7 270 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 C11orf94C9JXX5 98 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 SNRPCP09234 159 aaKnown RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 RBMY1A1P0DJD3 496 aaKnown RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 RBMY1CP0DJD4 496 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 IGLC2P0DOY2 106 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 HLA-DMBP28068 263 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 NANOS2P60321 138 aaKnown RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 HIST1H1AQ02539 215 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 RBMY1FQ15415 496 aaKnown RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 RGS21Q2M5E4 152 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 MORN5Q5VZ52 161 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF705AQ6ZN79 300 aaPredicted RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 OR11H7Q8NGC8 314 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 ASB13Q8WXK3 278 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 RPUSD4Q96CM3 377 aaKnown RBP5.32□□□□□ -1.56
CPSF7-224ENST00000544990 IGF2BP2-AS1Q96M15 143 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 TMEM208Q9BTX3 173 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 TMEM14CQ9P0S9 112 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 MBD2Q9UBB5 411 aa5.32□□□□□ -1.56
CPSF7-224ENST00000544990 TEX48A0A1B0GUV7 120 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF705FA8MVS1 300 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-224ENST00000544990 H3BQ15 152 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF253O75346 499 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 INSP01308 110 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 HBE1P02100 147 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF705DP0CH99 300 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF705BP0CI00 300 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-224ENST00000544990 HIST1H1EP10412 219 aaKnown RBP5.31□□□□□ -1.56
CPSF7-224ENST00000544990 FCN2Q15485 313 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 SPINK13Q1W4C9 94 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 RRN3P1Q2M238 152 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 AMTNQ6UX39 209 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 OR10J6PQ8NGY7 276 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 SAT2Q96F10 170 aaPredicted RBP5.31□□□□□ -1.56
CPSF7-224ENST00000544990 MRPL32Q9BYC8 188 aaKnown RBP5.31□□□□□ -1.56
CPSF7-224ENST00000544990 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 SMIM3Q9BZL3 60 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 PRELID1Q9Y255 219 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 TIMM9Q9Y5J7 89 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 RFNGQ9Y644 331 aa5.31□□□□□ -1.56
CPSF7-224ENST00000544990 DNAH7Q8WXX0 4024 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 TRBV19A0A075B6N1 114 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 H3BTX0 84 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 BOLA2-SMG1P6H3BVE0 249 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 M0R2Z0 102 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 SLC17A3O00476 420 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 GIPP09681 153 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-224ENST00000544990 SPART-AS1P0CW21 52 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 TSPOP30536 169 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 CDKN1BP46527 198 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 TCTAP57738 103 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 PDE6HQ13956 83 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 GCSAMLQ5JQS6 135 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 C2CD4CQ8TF44 421 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 BLNKQ8WV28 456 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 LINC00476Q8WZB0 136 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 PARD6GQ9BYG4 376 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-224ENST00000544990 OR51M1Q9H341 326 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 ZNF586Q9NXT0 402 aa5.3□□□□□ -1.56
CPSF7-224ENST00000544990 FUT9Q9Y231 359 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms