RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LTAP01374 205 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 PRB4P10163 310 aaPredicted RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 FAM106AQ4KMX7 169 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 MORN3Q6PF18 240 aaPredicted RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 C18orf32Q8TCD1 76 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 WIPF2Q8TF74 440 aaPredicted RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 OVOL2Q9BRP0 275 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 MSRB2Q9Y3D2 182 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 NCKAP5O14513 1909 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 IGHV3-49A0A0A0MS15 119 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 TCF15Q12870 199 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 CSTL1Q9H114 145 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 IGLC7A0M8Q6 106 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 INS-IGF2F8WCM5 200 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 M0R2P5 195 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 SIVA1O15304 175 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 RNASE1P07998 156 aaKnown RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 LGALS1P09382 135 aaKnown RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 PDE6HQ13956 83 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 C9orf153Q5TBE3 101 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 LYZL1Q6UWQ5 148 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 RITA1Q96K30 269 aa4.62□□□□□ -1.67
VPS50-220ENST00000544910 NAA38Q9BRA0 125 aaKnown RBP4.62□□□□□ -1.67
VPS50-220ENST00000544910 TRBV19A0A075B6N1 114 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 IFITM1P13164 125 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 SLAQ13239 276 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 C15orf32Q32M92 178 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 C2orf82Q6UX34 121 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 SIGLEC15Q6ZMC9 328 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 TRBV7-9A0A0J9YWB2 115 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 HAX1O00165 279 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 AZU1P20160 251 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 IFI27P40305 119 aaPredicted RBP4.61□□□□□ -1.67
VPS50-220ENST00000544910 C8orf49Q96NF6 230 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 LINC00574Q9H8X3 128 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 TRBV7-1A0A0A6YYK4 115 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 PRSS46E5RG02 174 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 LY6HO94772 140 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 COX6B1P14854 86 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 HTN1P15515 57 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 ZNF562Q6V9R5 426 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 GTSCR1Q86UQ5 136 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 PLEKHB2Q96CS7 222 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 PGPEP1Q9NXJ5 209 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 TNRC6AQ8NDV7 1962 aaKnown RBP4.61□□□□□ -1.67
VPS50-220ENST00000544910 TRAV41A0A0B4J266 112 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 IGHV2-70DA0A0C4DH43 119 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 D6R8Y8 96 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 COX8AP10176 69 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 C1orf229Q6ZS94 237 aaPredicted RBP4.61□□□□□ -1.67
VPS50-220ENST00000544910 BOD1L2Q8IYS8 172 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 EDA2RQ9HAV5 297 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 TNFRSF18Q9Y5U5 241 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 A0A1W2PPM0 123 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 M0R381 172 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 CD33P20138 364 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 PLA2G5P39877 138 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 GAGE5Q13069 117 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 GAGE6Q13070 117 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 TAL2Q16559 108 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 ASPHD1Q5U4P2 390 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 SFTA2Q6UW10 78 aa4.61□□□□□ -1.67
VPS50-220ENST00000544910 IGLC1P0CG04 106 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 RNASE4P34096 147 aaKnown RBP4.6□□□□□ -1.67
VPS50-220ENST00000544910 KLF5Q13887 457 aaPredicted RBP4.6□□□□□ -1.67
VPS50-220ENST00000544910 LY6DQ14210 128 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 FAM110DQ8TAY7 271 aaPredicted RBP4.6□□□□□ -1.67
VPS50-220ENST00000544910 IGHV1-24A0A0C4DH33 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 GAGE12JA6NER3 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 FAM223BA6NKX1 122 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 GAGE7O76087 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 GAGE12FP0CL80 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 GAGE12GP0CL81 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 GAGE12IP0CL82 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 GAGE4Q13068 117 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 FAM223AQ8IWN6 122 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 STPG4Q8N801 248 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 CGB3P0DN86 165 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 CGB7P0DN87 165 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 PAX8Q06710 450 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 FAM74A4Q5TZK3 123 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 RCHY1Q96PM5 261 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 UTF1Q5T230 341 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 BVES-AS1Q5T3Y7 98 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 MORN5Q5VZ52 161 aa4.6□□□□□ -1.67
VPS50-220ENST00000544910 BRWD1Q9NSI6 2320 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 GP9P14770 177 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 HOXB4P17483 251 aaPredicted RBP4.59□□□□□ -1.67
VPS50-220ENST00000544910 RAX2Q96IS3 184 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 DNAH12Q6ZR08 3092 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 PROP1O75360 226 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 UBE2E1P51965 193 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 PATE2Q6UY27 113 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 NPBQ8NG41 125 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 FAM167A-AS1Q96KT0 104 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 NDUFB8O95169 186 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 ARMS2P0C7Q2 107 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 SNRPD3P62318 126 aaKnown RBP4.59□□□□□ -1.67
VPS50-220ENST00000544910 Q8TAT8 98 aa4.59□□□□□ -1.67
VPS50-220ENST00000544910 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms