RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 VGLL1Q99990 258 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 MED13Q9UHV7 2174 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 ZNF833PQ6ZTB9 187 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 IL17RELQ6ZVW7 336 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 NDUFS7O75251 213 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 LY96Q9Y6Y9 160 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 IGHV2-70DA0A0C4DH43 119 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 GRNP28799 593 aaKnown RBP10.28□□□□□ -0.76
CHD4-211ENST00000544484 CMC4P56277 68 aaPredicted RBP10.28□□□□□ -0.76
CHD4-211ENST00000544484 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 CYYR1Q96J86 154 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 FNDC10F2Z333 226 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 FAM110DQ8TAY7 271 aaPredicted RBP10.28□□□□□ -0.76
CHD4-211ENST00000544484 MEGF9Q9H1U4 602 aa10.28□□□□□ -0.76
CHD4-211ENST00000544484 XCL2Q9UBD3 114 aa10.27□□□□□ -0.76
CHD4-211ENST00000544484 PLCE1Q9P212 2302 aa10.27□□□□□ -0.76
CHD4-211ENST00000544484 INSP01308 110 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 PIP4P1Q86T03 277 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 C8orf49Q96NF6 230 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 PLXNA2O75051 1894 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 CFHR2P36980 270 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 DTX2Q86UW9 622 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 TRAV8-2A0A0B4J237 113 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.27□□□□□ -0.77
CHD4-211ENST00000544484 WT1-ASQ06250 92 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 GUSBP1Q15486 140 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 SPINK13Q1W4C9 94 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 RASL11AQ6T310 242 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
CHD4-211ENST00000544484 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 VCYO14598 125 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 PCP4P48539 62 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
CHD4-211ENST00000544484 C15orf65H3BRN8 121 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 ACACBO00763 2458 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 ANAPC10Q9UM13 185 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 CKS1BP61024 79 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 CR1LQ2VPA4 569 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 TEX43Q6ZNM6 134 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 SLC25A20O43772 301 aa10.26□□□□□ -0.77
CHD4-211ENST00000544484 A0A1B0GUS0 222 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 ZNF479Q96JC4 524 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 E9PQ18 207 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 TEX36Q5VZQ5 186 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 DYSFO75923 2080 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 FRMPD3Q5JV73 1810 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 CFHR3Q02985 330 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 IGFBPL1Q8WX77 278 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 A0A1B0GV72 72 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 PYY3Q5JQD4 70 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 C1orf122Q6ZSJ8 110 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 C3orf56Q8N813 242 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 MS4A6AQ9H2W1 248 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 SMPXQ9UHP9 88 aa10.25□□□□□ -0.77
CHD4-211ENST00000544484 A0A087X0K7 114 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 WIPF3A6NGB9 483 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 PDE6HQ13956 83 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 ASPHD1Q5U4P2 390 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
CHD4-211ENST00000544484 TANC1Q9C0D5 1861 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 HAPLN4Q86UW8 402 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 TMEM86BQ8N661 226 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 GATA3P23771 443 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 HSD52Q0P140 79 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
CHD4-211ENST00000544484 NBL1P41271 181 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 ZNF726P1Q15940 193 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 OR2K2Q8NGT1 345 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 SLC25A2Q9BXI2 301 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 YPEL3P61236 119 aaPredicted RBP10.24□□□□□ -0.77
CHD4-211ENST00000544484 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
CHD4-211ENST00000544484 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
CHD4-211ENST00000544484 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 SYS1-DBNDD2H3BUS1 97 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 PAX4O43316 350 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 S100A7L2Q5SY68 101 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 FAM120AOSQ5T036 256 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 TRBV19A0A075B6N1 114 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 SRCAPQ6ZRS2 3230 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 M0R2P5 195 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 TDGF1P3P51864 188 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 ERG28Q9UKR5 140 aa10.23□□□□□ -0.77
CHD4-211ENST00000544484 GGTLC3B5MD39 225 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 TMEM190Q8WZ59 177 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 SPOCK3Q9BQ16 436 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 TRAV12-2A0A075B6T6 113 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 SAMD5Q5TGI4 173 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 SPXQ9BT56 116 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 CUL9Q8IWT3 2517 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 SPRNQ5BIV9 151 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 LINC01549A6NIU2 74 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 C22orf46C9J442 243 aa10.22□□□□□ -0.77
CHD4-211ENST00000544484 DENND4CQ5VZ89 1909 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms