RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 RNF183Q96D59 192 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 CLUHP3Q96NS8 147 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 TP53TG1Q9Y2A0 90 aa11.03□□□□□ -0.64
CD9-210ENST00000543916 M0R3E3 92 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 SPRY2O43597 315 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 STAG3L2P0CL84 134 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 STAG3L3P0CL85 134 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 ARL14EPLP0DKL9 152 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 CNN1P51911 297 aaKnown RBP11.02□□□□□ -0.65
CD9-210ENST00000543916 FXYD7P58549 80 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 PSG9Q00887 426 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 ZNF726P1Q15940 193 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 AMTNQ6UX39 209 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 PQLC2Q6ZP29 291 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 SLC35B3Q9H1N7 401 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
CD9-210ENST00000543916 DUSP14O95147 198 aaKnown RBP11.01□□□□□ -0.65
CD9-210ENST00000543916 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
CD9-210ENST00000543916 ICAM4Q14773 271 aa11.01□□□□□ -0.65
CD9-210ENST00000543916 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
CD9-210ENST00000543916 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
CD9-210ENST00000543916 ACTR3CQ9C0K3 210 aaPredicted RBP11.01□□□□□ -0.65
CD9-210ENST00000543916 PLA2G2EQ9NZK7 142 aa11.01□□□□□ -0.65
CD9-210ENST00000543916 SEC11BP0C7V7 166 aa11□□□□□ -0.65
CD9-210ENST00000543916 NUTF2P61970 127 aaKnown RBP11□□□□□ -0.65
CD9-210ENST00000543916 C9orf62Q8N4C0 152 aa11□□□□□ -0.65
CD9-210ENST00000543916 CSNK1G2-AS1Q8NCQ2 148 aa11□□□□□ -0.65
CD9-210ENST00000543916 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
CD9-210ENST00000543916 AAMDCQ9H7C9 122 aa11□□□□□ -0.65
CD9-210ENST00000543916 XCL2Q9UBD3 114 aa11□□□□□ -0.65
CD9-210ENST00000543916 PRELID1Q9Y255 219 aa11□□□□□ -0.65
CD9-210ENST00000543916 GCHFRP30047 84 aa10.99□□□□□ -0.65
CD9-210ENST00000543916 RANP62826 216 aaKnown RBP10.99□□□□□ -0.65
CD9-210ENST00000543916 BAP18Q8IXM2 172 aa10.99□□□□□ -0.65
CD9-210ENST00000543916 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
CD9-210ENST00000543916 Q9H3A6 140 aa10.99□□□□□ -0.65
CD9-210ENST00000543916 CTXND1A0A1B0GTU2 59 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 TPT1P13693 172 aaKnown RBP10.98□□□□□ -0.65
CD9-210ENST00000543916 EIF5AP63241 154 aaKnown RBP10.98□□□□□ -0.65
CD9-210ENST00000543916 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 OR10J6PQ8NGY7 276 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 TMED6Q8WW62 240 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 C1QTNF4Q9BXJ3 329 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 STAB2Q8WWQ8 2551 aa10.98□□□□□ -0.65
CD9-210ENST00000543916 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 M0R2Z0 102 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 CXorf1O96002 111 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 FHITP49789 147 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 SPINK13Q1W4C9 94 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 RARRES2Q99969 163 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 EDA2RQ9HAV5 297 aa10.97□□□□□ -0.65
CD9-210ENST00000543916 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.65
CD9-210ENST00000543916 BOLA2-SMG1P6H3BVE0 249 aa10.96□□□□□ -0.65
CD9-210ENST00000543916 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.65
CD9-210ENST00000543916 NKX2-5P52952 324 aaPredicted RBP10.96□□□□□ -0.65
CD9-210ENST00000543916 FGF8P55075 233 aaPredicted RBP10.96□□□□□ -0.65
CD9-210ENST00000543916 ERCC8Q13216 396 aa10.96□□□□□ -0.65
CD9-210ENST00000543916 WWC2-AS2Q96NR7 200 aa10.96□□□□□ -0.65
CD9-210ENST00000543916 MAP1LC3B2A6NCE7 125 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 PGPA6NDG6 321 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 ZNF705EA8MWA4 302 aaPredicted RBP10.95□□□□□ -0.66
CD9-210ENST00000543916 UMAD1C9J7I0 102 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 CRXO43186 299 aaPredicted RBP10.95□□□□□ -0.66
CD9-210ENST00000543916 SLC51BQ86UW2 128 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 IQCF2Q8IXL9 164 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 FAM213BQ8TBF2 198 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 MAP1LC3BQ9GZQ8 125 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 TMPRSS5Q9H3S3 457 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 X6R8D5 127 aa10.95□□□□□ -0.66
CD9-210ENST00000543916 TRAV12-2A0A075B6T6 113 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 A0A0J9YWU9 116 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 AMBPP02760 352 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 IGF2BP2-AS1Q96M15 143 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 VGLL1Q99990 258 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 AGPAT4-IT1Q9H0P7 198 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 TMEM167BQ9NRX6 74 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 PPP1R14DQ9NXH3 145 aa10.94□□□□□ -0.66
CD9-210ENST00000543916 CSN1S1P47710 185 aa10.93□□□□□ -0.66
CD9-210ENST00000543916 ZNF705AQ6ZN79 300 aaPredicted RBP10.93□□□□□ -0.66
CD9-210ENST00000543916 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
CD9-210ENST00000543916 Q8NAQ8 132 aa10.93□□□□□ -0.66
CD9-210ENST00000543916 IGHV3OR16-12A0A075B7B8 117 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 GGTLC3B5MD39 225 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 DIRC3C9JPN6 131 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 INSP01308 110 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 RBMY1A1P0DJD3 496 aaKnown RBP10.92□□□□□ -0.66
CD9-210ENST00000543916 RBMY1CP0DJD4 496 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 CDKN1BP46527 198 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 GNG5P63218 68 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 KIR3DS1Q14943 382 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 RBMY1FQ15415 496 aaKnown RBP10.92□□□□□ -0.66
CD9-210ENST00000543916 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 DPPA3Q6W0C5 159 aa10.92□□□□□ -0.66
CD9-210ENST00000543916 ODF3Q96PU9 254 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms